4R0C | pdb_00004r0c

Crystal structure of the Alcanivorax borkumensis YdaH transporter reveals an unusual topology


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyNucleoside permease-like 8053700 3002214 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyNucleoside permease-like 8053700 3002214 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNucleoside permease-like 8053700 3002214 SCOP2B (2022-06-29)
ASCOP2 FamilyAbgT-like 8044890 4004195 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyNucleoside permease-like 8053700 3002214 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De4r0cD1 A: HTHX: HTHH: Three-helical HTHT: ArmF:ECOD (20:10:01)
Ce4r0cC1 A: HTHX: HTHH: Three-helical HTHT: ArmF:ECOD (20:10:01)
Be4r0cB1 A: HTHX: HTHH: Three-helical HTHT: ArmF:ECOD (20:10:01)
Ae4r0cA1 A: HTHX: HTHH: Three-helical HTHT: ArmF:ECOD (20:10:01)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Membrane Protein Annotation: mpstruc mpstruc Database Homepage