4Q79 | pdb_00004q79

Structure of a HG-derivative CsgG

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD
Membrane Protein Annotation: mpstruc

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth B]	SCOP2B Superfamily	TolB N-terminal domain-like	8053475	3000482	SCOP2B (2022-06-29)
D [auth C]	SCOP2B Superfamily	TolB N-terminal domain-like	8053475	3000482	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	TolB N-terminal domain-like	8053475	3000482	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	TolB N-terminal domain-like	8053475	3000482	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	TolB N-terminal domain-like	8053475	3000482	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	TolB N-terminal domain-like	8053475	3000482	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	TolB N-terminal domain-like	8053475	3000482	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	TolB N-terminal domain-like	8053475	3000482	SCOP2B (2022-06-29)
A [auth D]	SCOP2B Superfamily	TolB N-terminal domain-like	8053475	3000482	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth B]	C2	e4q79B1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: C2	ECOD (v294.1)
D [auth C]	C2	e4q79C1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: C2	ECOD (v294.1)
E	C2	e4q79E1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: C2	ECOD (v294.1)
F	C2	e4q79F1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: C2	ECOD (v294.1)
I	C2	e4q79I1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: C2	ECOD (v294.1)
H	C2	e4q79H1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: C2	ECOD (v294.1)
G	C2	e4q79G1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: C2	ECOD (v294.1)
B [auth A]	C2	e4q79A1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: C2	ECOD (v294.1)
A [auth D]	C2	e4q79D1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: C2	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth D], B [auth A], C [auth B], D [auth C], E, A [auth D], B [auth A], C [auth B], D [auth C], E, F, G, H, I	CsgG	identical protein binding protein binding binding	-	cellular anatomical structure extracellular region outer membrane-bounded periplasmic space cell envelope periplasmic space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth D], B [auth A], C [auth B], D [auth C], E, A [auth D], B [auth A], C [auth B], D [auth C], E, F, G, H, I	IPR005534	Curli production assembly/transport component CsgG	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
A [auth D], B [auth A], C [auth B], D [auth C], E A [auth D], B [auth A], C [auth B], D [auth C], E, F, G, H, I	OPM	Transmembrane	Beta-barrel transmembrane	Curli-like transporters (n=36)	Curli-like transporters (n=36)

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth D], B [auth A], C [auth B], D [auth C], E A [auth D], B [auth A], C [auth B], D [auth C], E, F, G, H, I	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
A [auth D], B [auth A], C [auth B], D [auth C], E A [auth D], B [auth A], C [auth B], D [auth C], E, F, G, H, I	MemProtMD	Annotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth D], B [auth A], C [auth B], D [auth C], E A [auth D], B [auth A], C [auth B], D [auth C], E, F, G, H, I	mpstruc	TRANSMEMBRANE PROTEINS: BETA-BARREL	Beta-Barrel Membrane Proteins: Monomeric/Dimeric	CsgG bacterial amyloid secretion channel

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.