4PIF | pdb_00004pif

Crystal Structure of recombinant WT Banana Lectin

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d4pifd1	All beta proteins	beta-Prism I	Mannose-binding lectins	automated matches	automated matches	Banana (Musa acuminata ) [TaxId: 4641 ],	SCOPe (2.08)
D	d4pifd2	Artifacts	Tags	Tags	Tags	C-terminal Tags	Banana (Musa acuminata ) [TaxId: 4641 ],	SCOPe (2.08)
C	d4pifc1	All beta proteins	beta-Prism I	Mannose-binding lectins	automated matches	automated matches	Banana (Musa acuminata ) [TaxId: 4641 ],	SCOPe (2.08)
C	d4pifc2	Artifacts	Tags	Tags	Tags	C-terminal Tags	Banana (Musa acuminata ) [TaxId: 4641 ],	SCOPe (2.08)
B	d4pifb1	All beta proteins	beta-Prism I	Mannose-binding lectins	automated matches	automated matches	Banana (Musa acuminata ) [TaxId: 4641 ],	SCOPe (2.08)
B	d4pifb2	Artifacts	Tags	Tags	Tags	C-terminal Tags	Banana (Musa acuminata ) [TaxId: 4641 ],	SCOPe (2.08)
A	d4pifa1	All beta proteins	beta-Prism I	Mannose-binding lectins	automated matches	automated matches	Banana (Musa acuminata ) [TaxId: 4641 ],	SCOPe (2.08)
A	d4pifa2	Artifacts	Tags	Tags	Tags	C-terminal Tags	Banana (Musa acuminata ) [TaxId: 4641 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Mannose-binding lectins	8083672	3001715	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Mannose-binding lectins	8083672	3001715	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Mannose-binding lectins	8083672	3001715	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Mannose-binding lectins	8083672	3001715	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	p450	e4pifD1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: Rubredoxin-related	T: Rubredoxin-related	F: p450	ECOD (v294.1)
C	p450	e4pifC1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: Rubredoxin-related	T: Rubredoxin-related	F: p450	ECOD (v294.1)
B	p450	e4pifB1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: Rubredoxin-related	T: Rubredoxin-related	F: p450	ECOD (v294.1)
A	p450	e4pifA1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: Rubredoxin-related	T: Rubredoxin-related	F: p450	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
C	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
B	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)
A	2.100.10.30	Mainly Beta	Aligned Prism	Vitelline Membrane Outer Layer Protein I, subunit A	Jacalin-like lectin domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Ripening-associated protein	binding carbohydrate binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR036404	Jacalin-like lectin domain superfamily	Homologous Superfamily
A, B, C, D	IPR033734	Jacalin-like lectin domain, plant	Domain
A, B, C, D	IPR001229	Jacalin-like lectin domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.