Skip to main content

 4PFE | pdb_00004pfe

Crystal structure of vsfGFP-0

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BBBEe4pfeB1 A: alpha arraysX: Single-stranded right-handed beta-helixH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: BBEECOD (v295.2)
ABBEe4pfeA1 A: alpha arraysX: Single-stranded right-handed beta-helixH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: BBEECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.40.155.10 Mainly Beta Beta Barrel Green Fluorescent Protein Green fluorescent proteinCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A, B
Heavy ChainIGHV1 --SAbDab (2026-10-09)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Green fluorescent protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000786Green fluorescent protein, GFPFamily
A, B
IPR011584Green fluorescent protein-relatedFamily
A, B
IPR009017Green fluorescent proteinHomologous Superfamily