4P7B
Crystal structure of S. typhimurium peptidyl-tRNA hydrolase
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4p7ba_ | Alpha and beta proteins (a/b) | Phosphorylase/hydrolase-like | Peptidyl-tRNA hydrolase-like | Peptidyl-tRNA hydrolase-like | automated matches | (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ) [TaxId: 99287 ], | SCOPe (2.08) |
B [auth C] | d4p7bc_ | Alpha and beta proteins (a/b) | Phosphorylase/hydrolase-like | Peptidyl-tRNA hydrolase-like | Peptidyl-tRNA hydrolase-like | automated matches | (Salmonella enterica subsp. enterica serovar Typhimurium str. LT2 ) [TaxId: 99287 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Peptidyl-tRNA hydrolase-like | 8074927 | 4000577 | SCOP2 (2021-05-27) |
A | SCOP2 Superfamily | Peptidyl-tRNA hydrolase-like | 8074928 | 3000647 | SCOP2 (2021-05-27) |
B [auth C] | SCOP2B Superfamily | Peptidyl-tRNA hydrolase-like | 8074928 | 3000647 | SCOP2B (2021-05-27) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01195 | e4p7bA1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PF01195 | ECOD (1.6) |
B [auth C] | PF01195 | e4p7bC1 | A: a/b three-layered sandwiches | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like (From Topology) | T: Peptidyl-tRNA hydrolase-like | F: PF01195 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.1470 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Peptidyl-tRNA hydrolase | CATH (4.3.0) |
B [auth C] | 3.40.50.1470 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Peptidyl-tRNA hydrolase | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C] | PF01195 | Peptidyl-tRNA hydrolase (Pept_tRNA_hydro) | Peptidyl-tRNA hydrolase | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, B [auth C] | Peptidyl-tRNA hydrolase |
|
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C] | IPR018171 | Peptidyl-tRNA hydrolase, conserved site | Conserved Site |
A, B [auth C] | IPR036416 | Peptidyl-tRNA hydrolase superfamily | Homologous Superfamily |
A, B [auth C] | IPR001328 | Peptidyl-tRNA hydrolase | Family |