4P18 | pdb_00004p18

Crystal Structure of frog M ferritin mutant D80K

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
X	d4p18x_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
W	d4p18w_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
V	d4p18v_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
U	d4p18u_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
T [auth R]	d4p18r_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
S [auth Q]	d4p18q_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
R [auth L]	d4p18l_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
Q [auth K]	d4p18k_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
P [auth J]	d4p18j_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
O [auth I]	d4p18i_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
N [auth H]	d4p18h_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
M [auth G]	d4p18g_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
L [auth F]	d4p18f_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
K [auth E]	d4p18e_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
J [auth T]	d4p18t_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
I [auth S]	d4p18s_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
H [auth P]	d4p18p_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
G [auth O]	d4p18o_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
F [auth N]	d4p18n_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
E [auth M]	d4p18m_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
D	d4p18d_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
C	d4p18c_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
B	d4p18b_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)
A	d4p18a_	All alpha proteins	Ferritin-like	Ferritin-like	Ferritin	automated matches	American bullfrog (Aquarana catesbeiana ) [TaxId: 8400 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
X	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
W	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
V	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
U	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
T [auth R]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
S [auth Q]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
R [auth L]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
Q [auth K]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
P [auth J]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
O [auth I]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
N [auth H]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
M [auth G]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
L [auth F]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
K [auth E]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
J [auth T]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
I [auth S]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
H [auth P]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
G [auth O]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
F [auth N]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
E [auth M]	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Ferritin-like	8063914	3001658	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X	Epimerase, NmrA	e4p18X1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
W	Epimerase, NmrA	e4p18W1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
V	Epimerase, NmrA	e4p18V1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
U	Epimerase, NmrA	e4p18U1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
T [auth R]	Epimerase, NmrA	e4p18R1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
S [auth Q]	Epimerase, NmrA	e4p18Q1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
R [auth L]	Epimerase, NmrA	e4p18L1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
Q [auth K]	Epimerase, NmrA	e4p18K1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
P [auth J]	Epimerase, NmrA	e4p18J1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
O [auth I]	Epimerase, NmrA	e4p18I1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
N [auth H]	Epimerase, NmrA	e4p18H1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
M [auth G]	Epimerase, NmrA	e4p18G1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
L [auth F]	Epimerase, NmrA	e4p18F1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
K [auth E]	Epimerase, NmrA	e4p18E1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
J [auth T]	Epimerase, NmrA	e4p18T1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
I [auth S]	Epimerase, NmrA	e4p18S1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
H [auth P]	Epimerase, NmrA	e4p18P1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
G [auth O]	Epimerase, NmrA	e4p18O1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
F [auth N]	Epimerase, NmrA	e4p18N1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
E [auth M]	Epimerase, NmrA	e4p18M1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
D	Epimerase, NmrA	e4p18D1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
C	Epimerase, NmrA	e4p18C1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
B	Epimerase, NmrA	e4p18B1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)
A	Epimerase, NmrA	e4p18A1	A: a/b three-layered sandwiches	X: Thioredoxin-like	H: ClpP/crotonase	T: ClpP/crotonase	F: Epimerase, NmrA	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
X	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
W	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
V	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
U	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
T [auth R]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
S [auth Q]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
R [auth L]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
Q [auth K]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
P [auth J]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
O [auth I]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
N [auth H]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
M [auth G]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
L [auth F]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
K [auth E]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
J [auth T]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
I [auth S]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
H [auth P]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
G [auth O]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
F [auth N]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
E [auth M]	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
D	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
C	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
B	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)
A	1.20.1260.10	Mainly Alpha	Up-down Bundle	Ferritin	Ferritin, core subunit, four-helix bundle	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E [auth M], A, B, C, D, E [auth M], F [auth N], G [auth O], H [auth P], I [auth S], J [auth T], K [auth E], L [auth F], M [auth G], N [auth H], O [auth I], P [auth J], Q [auth K], R [auth L], S [auth Q], T [auth R], U, V, W, X	Ferritin, middle subunit	cation binding transition metal ion binding iron ion binding ion binding binding ferrous iron binding metal ion binding small molecule binding ferric iron binding oxidoreductase activity, acting on metal ions oxidoreductase activity ferroxidase activity oxidoreductase activity, acting on metal ions, oxygen as acceptor catalytic activity	intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport intracellular iron ion homeostasis inorganic ion homeostasis cellular homeostasis chemical homeostasis homeostatic process intracellular monoatomic cation homeostasis monoatomic ion homeostasis intracellular chemical homeostasis monoatomic cation homeostasis intracellular monoatomic ion homeostasis localization transport iron ion transport transition metal ion transport monoatomic ion transport monoatomic cation transport establishment of localization metal ion transport	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E [auth M], A, B, C, D, E [auth M], F [auth N], G [auth O], H [auth P], I [auth S], J [auth T], K [auth E], L [auth F], M [auth G], N [auth H], O [auth I], P [auth J], Q [auth K], R [auth L], S [auth Q], T [auth R], U, V, W, X	IPR009040	Ferritin-like diiron domain	Domain
A, B, C, D, E [auth M], A, B, C, D, E [auth M], F [auth N], G [auth O], H [auth P], I [auth S], J [auth T], K [auth E], L [auth F], M [auth G], N [auth H], O [auth I], P [auth J], Q [auth K], R [auth L], S [auth Q], T [auth R], U, V, W, X	IPR012347	Ferritin-like	Homologous Superfamily
A, B, C, D, E [auth M], A, B, C, D, E [auth M], F [auth N], G [auth O], H [auth P], I [auth S], J [auth T], K [auth E], L [auth F], M [auth G], N [auth H], O [auth I], P [auth J], Q [auth K], R [auth L], S [auth Q], T [auth R], U, V, W, X	IPR009078	Ferritin-like superfamily	Homologous Superfamily
A, B, C, D, E [auth M], A, B, C, D, E [auth M], F [auth N], G [auth O], H [auth P], I [auth S], J [auth T], K [auth E], L [auth F], M [auth G], N [auth H], O [auth I], P [auth J], Q [auth K], R [auth L], S [auth Q], T [auth R], U, V, W, X	IPR008331	Ferritin/DPS domain	Domain
A, B, C, D, E [auth M], A, B, C, D, E [auth M], F [auth N], G [auth O], H [auth P], I [auth S], J [auth T], K [auth E], L [auth F], M [auth G], N [auth H], O [auth I], P [auth J], Q [auth K], R [auth L], S [auth Q], T [auth R], U, V, W, X	IPR001519	Ferritin	Family
A, B, C, D, E [auth M], A, B, C, D, E [auth M], F [auth N], G [auth O], H [auth P], I [auth S], J [auth T], K [auth E], L [auth F], M [auth G], N [auth H], O [auth I], P [auth J], Q [auth K], R [auth L], S [auth Q], T [auth R], U, V, W, X	IPR014034	Ferritin, conserved site	Conserved Site