Crystal structure of TAL effector reveals the recognition between asparagine and guanine
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d4oska1 | All alpha proteins | Left-handed alpha-alpha superhelix | TAL effector-like | TAL (transcription activator-like) effector | automated matches | (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], | SCOPe (2.08) |
| A | d4oska2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], | SCOPe (2.08) |
| D [auth B] | d4oskb1 | All alpha proteins | Left-handed alpha-alpha superhelix | TAL effector-like | TAL (transcription activator-like) effector | automated matches | (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], | SCOPe (2.08) |
| D [auth B] | d4oskb3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], | SCOPe (2.08) |
| D [auth B] | d4oskb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Xanthomonas campestris pv. armoraciae ) [TaxId: 329463 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | TAL_effector | e4oskA1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
| D [auth B] | TAL_effector | e4oskB1 | A: alpha superhelices | X: Mitochondrial mTERF-like | H: Transcription activator-like effector (TALE) (From Topology) | T: Transcription activator-like effector (TALE) | F: TAL_effector | ECOD (1.6) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| B [auth I], E [auth G] | DNA (5'-D(*TP*GP*TP*CP*CP*AP*AP*CP*TP*AP*CP*TP*AP*GP*AP*CP*T)-3') | - | - | - |
| C [auth J], F [auth H] | DNA (5'-D(*AP*GP*TP*CP*TP*AP*GP*TP*AP*GP*TP*TP*GP*GP*AP*CP*A)-3') | - | - | - |
| A, D [auth B] | Hax3 | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| A, D [auth B] | IPR053450 | Transcription activator-like effector protein | Family |
| A, D [auth B] | IPR005042 | TAL effector repeat | Repeat |
