4OKS
Crystal Structure of Hepatitis C Virus NS3 Helicase Inhibitor Co-complex with Compound 19 [[6-(3,5-diaminophenyl)-1-(2-methoxy-5-nitrobenzyl)-1H-indol-3-yl]acetic acid]
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4oksa1 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | RNA helicase | HCV helicase domain, N-terminal domain | (Hepacivirus hominis ) [TaxId: 3052230 ], | SCOPe (2.08) |
B | d4oksb2 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | RNA helicase | HCV helicase domain, C-terminal domain | (Hepacivirus hominis ) [TaxId: 3052230 ], | SCOPe (2.08) |
B | d4oksb1 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | RNA helicase | HCV helicase domain, N-terminal domain | (Hepacivirus hominis ) [TaxId: 3052230 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF22027 | e4oksA1 | A: alpha arrays | X: C-terminal helical domain of RNA helicase (From Topology) | H: C-terminal helical domain of RNA helicase (From Topology) | T: C-terminal helical domain of RNA helicase | F: PF22027 | ECOD (1.6) |
A | F_UNCLASSIFIED | e4oksA2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF07652 | e4oksA3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07652 | ECOD (1.6) |
B | PF22027 | e4oksB2 | A: alpha arrays | X: C-terminal helical domain of RNA helicase (From Topology) | H: C-terminal helical domain of RNA helicase (From Topology) | T: C-terminal helical domain of RNA helicase | F: PF22027 | ECOD (1.6) |
B | F_UNCLASSIFIED | e4oksB1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF07652 | e4oksB3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF07652 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
A | 1.10.820.10 | Mainly Alpha | Orthogonal Bundle | RNA Helicase | Chain A, domain 3 | CATH (4.3.0) |
B | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
B | 1.10.820.10 | Mainly Alpha | Orthogonal Bundle | RNA Helicase | Chain A, domain 3 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF07652 | Flavivirus DEAD domain (Flavi_DEAD) | Flavivirus DEAD domain | - | Domain |