4N3Z
Crystal structure of Rabex-5delta and Rabaptin-5C21 complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d4n3zb_ | Coiled coil proteins | Parallel coiled-coil | G protein-binding domain | Rabaptin-5 | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C | d4n3zc_ | Coiled coil proteins | Parallel coiled-coil | G protein-binding domain | Rabaptin-5 | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | VPS9_1 | e4n3zA1 | A: alpha bundles | X: Bromodomain-like | H: RABEX-5 helical domain (From Topology) | T: RABEX-5 helical domain | F: VPS9_1 | ECOD (1.6) |
A | KOG2319_like_2nd | e4n3zA2 | A: alpha complex topology | X: VPS9 domain (From Topology) | H: VPS9 domain (From Topology) | T: VPS9 domain | F: KOG2319_like_2nd | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1050.80 | Mainly Alpha | Up-down Bundle | Glutathione S-transferase Yfyf (Class Pi) | Chain A, domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09311 | Rabaptin-like protein (Rab5-bind) | Rabaptin-like protein | - | Coiled-coil |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002653 | Zinc finger, A20-type | Domain | |
IPR045046 | Vacuolar protein sorting-associated protein 9-like | Family | |
IPR003123 | VPS9 domain | Domain | |
IPR041545 | RABX5, catalytic core helical domain | Domain | |
IPR037191 | VPS9 domain superfamily | Homologous Superfamily | |
IPR003914 | Rabaptin | Family | |
IPR015390 | Rabaptin, GTPase-Rab5 binding domain | Domain | |
IPR018514 | Rabaptin coiled-coil domain | Domain |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q15276 | :