4M9S
crystal structure of CED-4 bound CED-3 fragment
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | RecA-like P-loop NTPases | 8003074 | 3002019 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | DNA polymerases epsilon N-terminal domain (Dpoe2NT)-like | 8104155 | 3002834 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Winged helix DNA-binding domain | 8003079 | 3000034 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | DEATH domain | 8003077 | 3000069 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8003079 | 3000034 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | DNA polymerases epsilon N-terminal domain (Dpoe2NT)-like | 8104155 | 3002834 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8003074 | 3002019 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | DEATH domain | 8003077 | 3000069 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8003074 | 3002019 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8003079 | 3000034 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | DNA polymerases epsilon N-terminal domain (Dpoe2NT)-like | 8104155 | 3002834 | SCOP2B (2022-06-29) |
E [auth C] | SCOP2B Superfamily | DEATH domain | 8003077 | 3000069 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | DEATH domain | 8003077 | 3000069 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | RecA-like P-loop NTPases | 8003074 | 3002019 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | DNA polymerases epsilon N-terminal domain (Dpoe2NT)-like | 8104155 | 3002834 | SCOP2B (2022-06-29) |
G [auth D] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8003079 | 3000034 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF22094 | e4m9sA4 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF22094 | ECOD (1.6) |
A | PF00619 | e4m9sA2 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PF00619 | ECOD (1.6) |
A | PF00931 | e4m9sA5 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF00931 | ECOD (1.6) |
A | PF00931 | e4m9sA6 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00931 | ECOD (1.6) |
C [auth B] | PF22094 | e4m9sB6 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF22094 | ECOD (1.6) |
C [auth B] | PF00619 | e4m9sB2 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PF00619 | ECOD (1.6) |
C [auth B] | PF00931 | e4m9sB5 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF00931 | ECOD (1.6) |
C [auth B] | PF00931 | e4m9sB4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00931 | ECOD (1.6) |
E [auth C] | PF22094 | e4m9sC4 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF22094 | ECOD (1.6) |
E [auth C] | PF00619 | e4m9sC2 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PF00619 | ECOD (1.6) |
E [auth C] | PF00931 | e4m9sC5 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF00931 | ECOD (1.6) |
E [auth C] | PF00931 | e4m9sC6 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00931 | ECOD (1.6) |
G [auth D] | PF22094 | e4m9sD6 | A: alpha arrays | X: HTH | H: HTH | T: winged | F: PF22094 | ECOD (1.6) |
G [auth D] | PF00619 | e4m9sD2 | A: alpha arrays | X: DEATH domain | H: DEATH domain (From Topology) | T: DEATH domain | F: PF00619 | ECOD (1.6) |
G [auth D] | PF00931 | e4m9sD5 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF00931 | ECOD (1.6) |
G [auth D] | PF00931 | e4m9sD4 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00931 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | PF00931 | NB-ARC domain (NB-ARC) | NB-ARC domain | - | Domain |
A, C [auth B], E [auth C], G [auth D] | PF00619 | Caspase recruitment domain (CARD) | Caspase recruitment domain | Motif contained in proteins involved in apoptotic signaling. Predicted to possess a DEATH (Pfam:PF00531) domain-like fold . | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, C [auth B], E [auth C], G [auth D] | IPR002182 | NB-ARC | Domain |
A, C [auth B], E [auth C], G [auth D] | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
A, C [auth B], E [auth C], G [auth D] | IPR011029 | Death-like domain superfamily | Homologous Superfamily |
A, C [auth B], E [auth C], G [auth D] | IPR036388 | Winged helix-like DNA-binding domain superfamily | Homologous Superfamily |
A, C [auth B], E [auth C], G [auth D] | IPR036390 | Winged helix DNA-binding domain superfamily | Homologous Superfamily |
A, C [auth B], E [auth C], G [auth D] | IPR016854 | Apoptosis regulator, Ced-4 | Family |
A, C [auth B], E [auth C], G [auth D] | IPR001315 | CARD domain | Domain |