4L9G | pdb_00004l9g

Structure of PpsR N-Q-PAS1 from Rb. sphaeroides


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPASe4l9gB1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
BUNK_F_TYPEe4l9gB2 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: UNK_F_TYPEECOD (1.6)
APASe4l9gA1 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: PASECOD (1.6)
AUNK_F_TYPEe4l9gA2 A: a+b three layersX: Profilin-likeH: sensor domains (From Topology)T: sensor domainsF: UNK_F_TYPEECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.30.450.20 Alpha Beta 2-Layer Sandwich Beta-Lactamase PAS domainCATH (4.3.0)
A3.30.450.20 Alpha Beta 2-Layer Sandwich Beta-Lactamase PAS domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13188PAS domain (PAS_8)PAS domainPAS domains are involved in many signalling proteins where they are used as a signal sensor domain [1]. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofac ...PAS domains are involved in many signalling proteins where they are used as a signal sensor domain [1]. PAS domains appear in archaea, bacteria and eukaryotes. Several PAS-domain proteins are known to detect their signal by way of an associated cofactor. Heme, flavin, and a 4-hydroxycinnamyl chromophore are used in different proteins. This domain recognises oxygen and CO (Matilla et al., FEMS Microbiology Reviews, fuab043, 45, 2021, 1. https://doi.org/10.1093/femsre/fuab043).
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Transcriptional regulator, PpsR - -

InterPro: Protein Family Classification InterPro Database Homepage