4L9C | pdb_00004l9c

Crystal structure of the FP domain of human F-box protein Fbxo7 (native)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	PI31 FP domain-like	8053437	3002186	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	PI31 FP domain-like	8053437	3002186	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PI31_Prot_N	e4l9cB1	A: a+b two layers	X: Type III secretory system chaperone-like	H: FP (Fbxo7/PI31) dimerization domain (From Topology)	T: FP (Fbxo7/PI31) dimerization domain	F: PI31_Prot_N	ECOD (1.6)
A	PI31_Prot_N	e4l9cA1	A: a+b two layers	X: Type III secretory system chaperone-like	H: FP (Fbxo7/PI31) dimerization domain (From Topology)	T: FP (Fbxo7/PI31) dimerization domain	F: PI31_Prot_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.40.1000.30	Alpha Beta	3-Layer(aba) Sandwich	Protein Transport Mog1p	Chain A	CATH (4.3.0)
A	3.40.1000.30	Alpha Beta	3-Layer(aba) Sandwich	Protein Transport Mog1p	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF11566	PI31 proteasome regulator N-terminal (PI31_Prot_N)	PI31 proteasome regulator N-terminal	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	F-box only protein 7	protein heterodimerization activity protein binding binding protein dimerization activity ubiquitin-like ligase-substrate adaptor activity enzyme-substrate adaptor activity protein-macromolecule adaptor activity molecular adaptor activity ubiquitin binding ubiquitin-like protein binding kinase binding enzyme binding protein kinase binding ubiquitin protein ligase binding protein heterodimerization activity protein binding binding protein dimerization activity ubiquitin-like ligase-substrate adaptor activity enzyme-substrate adaptor activity protein-macromolecule adaptor activity molecular adaptor activity ubiquitin binding ubiquitin-like protein binding kinase binding enzyme binding protein kinase binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity transferase activity catalytic activity ubiquitin-protein transferase activity	localization establishment of protein localization establishment of protein localization to organelle protein targeting protein targeting to mitochondrion establishment of protein localization to mitochondrion establishment of localization positive regulation of autophagy regulation of biological process catabolic process regulation of cellular process autophagy biological regulation positive regulation of biological process localization establishment of protein localization establishment of protein localization to organelle protein targeting protein targeting to mitochondrion establishment of protein localization to mitochondrion establishment of localization positive regulation of autophagy regulation of biological process catabolic process regulation of cellular process autophagy biological regulation positive regulation of biological process regulation of catabolic process regulation of autophagy positive regulation of autophagy of mitochondrion positive regulation of catabolic process positive regulation of metabolic process cellular process metabolic process regulation of autophagy of mitochondrion process utilizing autophagic mechanism regulation of metabolic process autophagy of mitochondrion positive regulation of cellular process primary metabolic process protein ubiquitination macromolecule modification protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal proteolysis involved in protein catabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process regulation of protein stability regulation of biological quality developmental process multicellular organismal process cellular developmental process hemopoiesis cell activation cell development mononuclear cell differentiation lymphocyte differentiation lymphocyte activation leukocyte activation cell differentiation immune system process anatomical structure development leukocyte differentiation regulation of leukocyte differentiation regulation of developmental process regulation of leukocyte activation negative regulation of biological process regulation of cell activation regulation of cell differentiation negative regulation of lymphocyte activation regulation of cell development multicellular organism development negative regulation of cellular process regulation of immune system process regulation of multicellular organismal process negative regulation of cell differentiation negative regulation of hemopoiesis regulation of lymphocyte differentiation regulation of multicellular organismal development negative regulation of leukocyte differentiation negative regulation of developmental process negative regulation of cell activation negative regulation of cell development negative regulation of immune system process negative regulation of lymphocyte differentiation regulation of hemopoiesis negative regulation of multicellular organismal process negative regulation of leukocyte activation regulation of lymphocyte activation regulation of cell cycle phase transition negative regulation of cell cycle cell cycle phase transition regulation of cell cycle G1/S phase transition cell cycle G1/S phase transition mitotic cell cycle negative regulation of mitotic cell cycle regulation of mitotic cell cycle negative regulation of cell cycle phase transition cell cycle regulation of cell cycle cell cycle process negative regulation of G1/S transition of mitotic cell cycle negative regulation of mitotic cell cycle phase transition regulation of cell cycle process negative regulation of cell cycle G1/S phase transition negative regulation of cell cycle process regulation of mitotic cell cycle phase transition mitotic cell cycle process regulation of G1/S transition of mitotic cell cycle G1/S transition of mitotic cell cycle mitotic cell cycle phase transition protein polyubiquitination protein K48-linked ubiquitination cellular response to stimulus intrinsic apoptotic signaling pathway in response to oxidative stress neuron apoptotic process regulation of oxidative stress-induced intrinsic apoptotic signaling pathway response to stimulus negative regulation of neuron apoptotic process signaling negative regulation of signaling negative regulation of intracellular signal transduction regulation of signal transduction regulation of programmed cell death regulation of intrinsic apoptotic signaling pathway intracellular signal transduction negative regulation of cell communication cell communication regulation of intracellular signal transduction negative regulation of apoptotic signaling pathway signal transduction intrinsic apoptotic signaling pathway regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway regulation of signaling negative regulation of response to stimulus negative regulation of programmed cell death regulation of apoptotic process negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway cell death negative regulation of signal transduction neuron intrinsic apoptotic signaling pathway in response to oxidative stress apoptotic signaling pathway negative regulation of intrinsic apoptotic signaling pathway negative regulation of apoptotic process regulation of response to stimulus negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway regulation of cell communication apoptotic process programmed cell death regulation of neuron apoptotic process regulation of apoptotic signaling pathway macroautophagy mitophagy positive regulation of macroautophagy positive regulation of mitophagy regulation of mitophagy regulation of macroautophagy regulation of neuron projection development regulation of cellular component organization cell projection organization neuron projection development cellular component organization neurogenesis neuron differentiation cellular component organization or biogenesis system development plasma membrane bounded cell projection organization regulation of cell projection organization nervous system development generation of neurons neuron development regulation of plasma membrane bounded cell projection organization regulation of locomotion locomotion	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle inclusion body Lewy body Lewy body corona classical Lewy body cytosol glial cytoplasmic inclusion membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle inclusion body Lewy body Lewy body corona classical Lewy body cytosol glial cytoplasmic inclusion cell projection Lewy neurite neuron projection plasma membrane bounded cell projection nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen cullin-RING ubiquitin ligase complex protein-containing complex ubiquitin ligase complex catalytic complex SCF ubiquitin ligase complex transferase complex intracellular protein-containing complex Lewy body core

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR001810	F-box domain	Domain
A, B	IPR036047	F-box-like domain superfamily	Homologous Superfamily
A, B	IPR021625	PI31 proteasome regulator, N-terminal	Domain
A, B	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily
A, B	IPR047118	F-box only protein 7	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B	Pharos: Q9Y3I1	parkinsonian-pyramidal syndrome Parkinson disease intellectual disability ovarian cancer Parkinsonism psoriasis neurodegenerative disease pilocytic astrocytoma osteosarcoma plasma cell myeloma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.