4KR8
Salmonella typhi OmpF complex with Daunomycin
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4kr8a_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Porin | automated matches | (Salmonella enterica subsp. enterica serovar Typhi ) [TaxId: 90370 ], | SCOPe (2.08) |
B | d4kr8b_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Porin | automated matches | (Salmonella enterica subsp. enterica serovar Typhi ) [TaxId: 90370 ], | SCOPe (2.08) |
C | d4kr8c_ | Membrane and cell surface proteins and peptides | Transmembrane beta-barrels | Porins | Porin | automated matches | (Salmonella enterica subsp. enterica serovar Typhi ) [TaxId: 90370 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00267 | e4kr8A1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: PF00267 | ECOD (1.6) |
B | PF00267 | e4kr8B1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: PF00267 | ECOD (1.6) |
C | PF00267 | e4kr8C1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: PF00267 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.160.10 | Mainly Beta | Beta Barrel | Porin | Porin | CATH (4.3.0) |
B | 2.40.160.10 | Mainly Beta | Beta Barrel | Porin | Porin | CATH (4.3.0) |
C | 2.40.160.10 | Mainly Beta | Beta Barrel | Porin | Porin | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00267 | Gram-negative porin (Porin_1) | Gram-negative porin | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Outer membrane protein F |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR033900 | Porin domain, Gram-negative type | Domain | |
IPR023614 | Porin domain superfamily | Homologous Superfamily | |
IPR001702 | Porin, Gram-negative type | Family | |
IPR013793 | Porin, Gram-negative type, conserved site | Conserved Site | |
IPR001897 | Porin, gammaproteobacterial | Family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |