4K30 | pdb_00004k30

Structure of the N-acetyltransferase domain of human N-acetylglutamate synthase

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth Y]	SCOP2B Superfamily	Acyl-CoA N-acyltransferases (Nat)	8101144	3000403	SCOP2B (2022-06-29)
C [auth X]	SCOP2 Family	N-acetylglutamate synthase NAT domain-like	8046429	4005074	SCOP2 (2022-06-29)
C [auth X]	SCOP2 Superfamily	Acyl-CoA N-acyltransferases (Nat)	8101144	3000403	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Acyl-CoA N-acyltransferases (Nat)	8101144	3000403	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Acyl-CoA N-acyltransferases (Nat)	8101144	3000403	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth Y]	Ribosomal_S4e	e4k30Y1	A: a/b three-layered sandwiches	X: jelly-roll	H: Galactose-binding domain-like	T: Galactose-binding domain-like	F: Ribosomal_S4e	ECOD (v294.1)
C [auth X]	Ribosomal_S4e	e4k30X1	A: a/b three-layered sandwiches	X: jelly-roll	H: Galactose-binding domain-like	T: Galactose-binding domain-like	F: Ribosomal_S4e	ECOD (v294.1)
B	Ribosomal_S4e	e4k30B1	A: a/b three-layered sandwiches	X: jelly-roll	H: Galactose-binding domain-like	T: Galactose-binding domain-like	F: Ribosomal_S4e	ECOD (v294.1)
A	Ribosomal_S4e	e4k30A1	A: a/b three-layered sandwiches	X: jelly-roll	H: Galactose-binding domain-like	T: Galactose-binding domain-like	F: Ribosomal_S4e	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D [auth Y]	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
C [auth X]	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
B	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)
A	3.40.630.30	Alpha Beta	3-Layer(aba) Sandwich	Aminopeptidase	Gcn5-related N-acetyltransferase (GNAT)	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C [auth X], D [auth Y]	PF04768	NAT, N-acetyltransferase, of N-acetylglutamate synthase (NAT)	NAT, N-acetyltransferase, of N-acetylglutamate synthase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C [auth X], D [auth Y]	N-acetylglutamate synthase, mitochondrial	acyltransferase activity transferase activity catalytic activity L-glutamate N-acetyltransferase activity, acting on acetyl-CoA as donor L-amino-acid N-acetyltransferase activity amino acid acyltransferase activity	L-arginine biosynthetic process oxoacid metabolic process small molecule biosynthetic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process L-amino acid biosynthetic process organic acid metabolic process organic acid biosynthetic process alpha-amino acid metabolic process L-glutamine family amino acid biosynthetic process L-amino acid metabolic process carboxylic acid biosynthetic process arginine metabolic process proteinogenic amino acid metabolic process L-arginine biosynthetic process oxoacid metabolic process small molecule biosynthetic process carboxylic acid metabolic process amino acid metabolic process primary metabolic process L-amino acid biosynthetic process organic acid metabolic process organic acid biosynthetic process alpha-amino acid metabolic process L-glutamine family amino acid biosynthetic process L-amino acid metabolic process carboxylic acid biosynthetic process arginine metabolic process proteinogenic amino acid metabolic process amino acid biosynthetic process biosynthetic process proteinogenic amino acid biosynthetic process metabolic process cellular process small molecule metabolic process alpha-amino acid biosynthetic process dicarboxylic acid metabolic process glutamate metabolic process nitrogen cycle metabolic process urea cycle urea metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen organelle lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C [auth X], D [auth Y]	IPR016181	Acyl-CoA N-acyltransferase	Homologous Superfamily
A, B, C [auth X], D [auth Y]	IPR001048	Aspartate/glutamate/uridylate kinase	Domain
A, B, C [auth X], D [auth Y]	IPR011243	N-acetylglutamate synthase, animal	Family
A, B, C [auth X], D [auth Y]	IPR006855	Vertebrate-like NAGS Gcn5-related N-acetyltransferase (GNAT) domain	Domain
A, B, C [auth X], D [auth Y]	IPR000182	GNAT domain	Domain
A, B, C [auth X], D [auth Y]	IPR036393	Acetylglutamate kinase-like superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C [auth X], D [auth Y]	Pharos: Q8N159	hyperammonemia due to N-acetylglutamate synthase deficiency Hyperammonemia argininosuccinic aciduria urea cycle disorder intellectual disability

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.