4JRF

Crystal structure of a putative cell adhesion protein (BACOVA_01548) from Bacteroides ovatus ATCC 8483 at 1.98 A resolution (PSI Community Target, Nakayama)

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Fimbrial shaft protein Mfa1-like	8051307	4007296	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	FimA/Mfa2-like	8102579	3002736	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	FimA/Mfa2-like	8102581	3002736	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	F_UNCLASSIFIED	e4jrfA1	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Prealbumin-like	F: F_UNCLASSIFIED	ECOD (1.6)
A	PF15495	e4jrfA2	A: beta sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Prealbumin-like	F: PF15495	ECOD (1.6)
A	F_UNCLASSIFIED	e4jrfA3	A: a+b two layers	X: putative cell adhesion protein BACOVA_01548 insertion domain (From Topology)	H: putative cell adhesion protein BACOVA_01548 insertion domain (From Topology)	T: putative cell adhesion protein BACOVA_01548 insertion domain	F: F_UNCLASSIFIED	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.60.40.2580	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
A	2.60.40.3690	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
A	1.10.20.150	Mainly Alpha	Orthogonal Bundle	Histone, subunit A		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF15495	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal (Fimbrillin_C)	Major fimbrial subunit protein type IV, Fimbrillin, C-terminal	Fimbrillin_C is a C-terminal family of major fimbrial subunit protein type IV proteins largely from Bacillus species. The family is associated with family P_gingi_FimA, Pfam:PF06321.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	putative cell adhesion protein	cation binding ion binding binding metal ion binding small molecule binding	-	pilus cell projection cellular anatomical entity pilus shaft cell periphery cell outer membrane external encapsulating structure membrane cell envelope outer membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR029140	Fimbrial subunit protein, C-terminal	Domain
A	IPR047786	Fimbria major subunit Mfa1	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.