4JQD | pdb_00004jqd

Crystal structure of the Restriction-Modification Controller Protein C.Csp231I OL operator complex

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ee4jqdE1 A: HTHX: HTHH: tetra-helical, lambda repressor-likeT: HTH_3F:ECOD (20:10:01)
Fe4jqdF1 A: DEATH domainX: 6-phosphogluconate dehydrogenase C-terminal domain-likeH: 6-phosphogluconate dehydrogenase C-terminal domain-likeT:F:ECOD (20:10:01)
Be4jqdB1 A: DEATH domainX: 6-phosphogluconate dehydrogenase C-terminal domain-likeH: 6-phosphogluconate dehydrogenase C-terminal domain-likeT:F:ECOD (20:10:01)
Ae4jqdA1 A: DEATH domainX: 6-phosphogluconate dehydrogenase C-terminal domain-likeH: 6-phosphogluconate dehydrogenase C-terminal domain-likeT:F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
E1.10.260.40 Mainly Alpha Orthogonal Bundle 434 Repressor (Amino-terminal Domain) lambda repressor-like DNA-binding domainsCATH (4.3.0)
F1.10.260.40 Mainly Alpha Orthogonal Bundle 434 Repressor (Amino-terminal Domain) lambda repressor-like DNA-binding domainsCATH (4.3.0)
B1.10.260.40 Mainly Alpha Orthogonal Bundle 434 Repressor (Amino-terminal Domain) lambda repressor-like DNA-binding domainsCATH (4.3.0)
A1.10.260.40 Mainly Alpha Orthogonal Bundle 434 Repressor (Amino-terminal Domain) lambda repressor-like DNA-binding domainsCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D, H
DNA (5'-D(*TP*TP*AP*CP*TP*AP*AP*GP*TP*TP*TP*TP*CP*CP*TP*TP*AP*GP*TP*GP*T)-3')---
C, G
DNA (5'-D(*AP*CP*AP*CP*TP*AP*AP*GP*GP*AP*AP*AP*AP*CP*TP*TP*AP*GP*TP*AP*A)-3')---
A, B, E, F
Csp231I C protein - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, E, F
IPR001387Cro/C1-type, helix-turn-helix domainDomain
A, B, E, F
IPR010982Lambda repressor-like, DNA-binding domain superfamilyHomologous Superfamily