4J2G | pdb_00004j2g

Atg13 HORMA domain

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Polysacc_synt_2,Polysacc_syn_2C	e4j2gB1	A: a/b three-layered sandwiches	X: jelly-roll	H: Galactose-binding domain-like	T: Galactose-binding domain-like	F: Polysacc_synt_2,Polysacc_syn_2C	ECOD (v294.1)
A	Bcl-2,BH4	e4j2gA2	A: a/b three-layered sandwiches	X: Subtilisin-like	H: Subtilisin-like	T: Subtilisin-like	F: Bcl-2,BH4	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.900.10	Alpha Beta	2-Layer Sandwich	Cell Cycle, Spindle Assembly Checkpoint Protein	Chain A	CATH (4.3.0)
A	3.30.900.10	Alpha Beta	2-Layer Sandwich	Cell Cycle, Spindle Assembly Checkpoint Protein	Chain A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF10033	Autophagy-related protein 13 (ATG13)	Autophagy-related protein 13	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	KLTH0A00704p	-	mitophagy catabolic process macroautophagy autophagy cellular process metabolic process autophagy of mitochondrion process utilizing autophagic mechanism autophagosome assembly organelle assembly vacuole organization autophagosome organization cellular component biogenesis cellular component organization mitophagy catabolic process macroautophagy autophagy cellular process metabolic process autophagy of mitochondrion process utilizing autophagic mechanism autophagosome assembly organelle assembly vacuole organization autophagosome organization cellular component biogenesis cellular component organization localization organelle organization cellular component assembly macromolecule localization protein localization to phagophore assembly site cellular component organization or biogenesis intracellular protein localization piecemeal microautophagy of the nucleus microautophagy nucleophagy	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol protein kinase complex transferase complex, transferring phosphorus-containing groups protein-containing complex catalytic complex serine/threonine protein kinase complex Atg1/ULK1 kinase complex transferase complex phagophore assembly site

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036570	HORMA domain superfamily	Homologous Superfamily
A, B	IPR040182	Autophagy-related protein 13	Family
A, B	IPR018731	Autophagy-related protein 13, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.