Annotations: 4IT5

Chaperone HscB from Vibrio cholerae

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	TGF_beta	e4it5A5	A: alpha arrays	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: TGF_beta	ECOD (v295)
C	TGF_beta	e4it5C5	A: alpha arrays	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: TGF_beta	ECOD (v295)
D	TGF_beta	e4it5D5	A: alpha arrays	X: PH domain-like	H: PH domain-like	T: PH domain-like	F: TGF_beta	ECOD (v295)
B	SH3_2	e4it5B3	A: alpha arrays	X: Fusion glycoprotein F2	H: HTH	T: winged helix domain	F: SH3_2	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.287.110	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	DnaJ domain	CATH (4.3.0)
A	1.20.1280.20	Mainly Alpha	Up-down Bundle	Monooxygenase	HscB, C-terminal domain	CATH (4.3.0)
C	1.10.287.110	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	DnaJ domain	CATH (4.3.0)
C	1.20.1280.20	Mainly Alpha	Up-down Bundle	Monooxygenase	HscB, C-terminal domain	CATH (4.3.0)
D	1.10.287.110	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	DnaJ domain	CATH (4.3.0)
D	1.20.1280.20	Mainly Alpha	Up-down Bundle	Monooxygenase	HscB, C-terminal domain	CATH (4.3.0)
B	1.10.287.110	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	DnaJ domain	CATH (4.3.0)
B	1.20.1280.20	Mainly Alpha	Up-down Bundle	Monooxygenase	HscB, C-terminal domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00226	DnaJ domain (DnaJ)	DnaJ domain	DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are conf ...	DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature [2].	Domain
A, B, C, D	PF07743	HSCB C-terminal oligomerisation domain (HSCB_C)	HSCB C-terminal oligomerisation domain	This domain is the HSCB C-terminal oligomerisation domain and is found on co-chaperone proteins.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Co-chaperone protein HscB homolog	ATPase activator activity molecular function activator activity molecular function regulator activity protein binding binding protein-folding chaperone binding	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis metallo-sulfur cluster assembly iron-sulfur cluster assembly [2Fe-2S] cluster assembly protein folding biosynthetic process metabolic process cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein complex oligomerization protein-containing complex assembly cellular process cellular component organization or biogenesis metallo-sulfur cluster assembly iron-sulfur cluster assembly [2Fe-2S] cluster assembly protein folding biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process gene expression macromolecule biosynthetic process protein maturation	protein-containing complex iron-sulfur cluster transfer complex catalytic complex transferase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001623	DnaJ domain	Domain
A, B, C, D	IPR004640	Co-chaperone Hsc20	Family
A, B, C, D	IPR036386	HscB, C-terminal domain superfamily	Homologous Superfamily
A, B, C, D	IPR009073	Co-chaperone HscB, C-terminal oligomerisation domain	Domain
A, B, C, D	IPR036869	Chaperone J-domain superfamily	Homologous Superfamily

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.