4IRE | pdb_00004ire

Crystal structure of GLIC with mutations at the loop C region

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BSNasee4ireB1 A: a/b three-layered sandwichesX: Long alpha-hairpinH: C-terminal UvrC-binding domain of UvrBT: C-terminal UvrC-binding domain of UvrBF: SNaseECOD (v294.1)
CPeptidase_M10e4ireC1 A: a/b three-layered sandwichesX: all-alpha NTP pyrophosphatasesH: all-alpha NTP pyrophosphatasesT: MazG-relatedF: Peptidase_M10ECOD (v294.1)
DPeptidase_M10e4ireD1 A: a/b three-layered sandwichesX: all-alpha NTP pyrophosphatasesH: all-alpha NTP pyrophosphatasesT: MazG-relatedF: Peptidase_M10ECOD (v294.1)
EPeptidase_M10e4ireE1 A: a/b three-layered sandwichesX: all-alpha NTP pyrophosphatasesH: all-alpha NTP pyrophosphatasesT: MazG-relatedF: Peptidase_M10ECOD (v294.1)
APeptidase_M10e4ireA1 A: a/b three-layered sandwichesX: all-alpha NTP pyrophosphatasesH: all-alpha NTP pyrophosphatasesT: MazG-relatedF: Peptidase_M10ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
B1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
C2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
C1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
D2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
D1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
E2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
E1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)
A2.70.170.10 Mainly Beta Distorted Sandwich Acetylcholine Binding Protein Chain: A,CATH (4.3.0)
A1.20.58.390 Mainly Alpha Up-down Bundle Methane Monooxygenase Hydroxylase Chain G, domain 1CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Proton-gated ion channel -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
A, B, C, D, E
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
A, B, C, D, E
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
A, B, C, D, E
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR006201Neurotransmitter-gated ion-channelFamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B, C, D, E
MemProtMDAnnotated as membrane protein by MemProtMD