HLA-DO in complex with HLA-DM
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2B Superfamily | MHC antigen-recognition domain | 8034719 | 3000521 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054691 | 3000071 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054691 | 3000071 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | MHC antigen-recognition domain | 8034719 | 3000521 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Peptidase_M4,Peptidase_M4_C | e4i0pA1 | A: a/b three-layered sandwiches | X: Globin-like | H: Ring-building motif I in type III secretion system | T: Ring-building motif I in type III secretion system | F: Peptidase_M4,Peptidase_M4_C | ECOD (v294.1) |
| E | ABC_tran | e4i0pE1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: ABC_tran | ECOD (v294.1) |
| B | ABC_tran | e4i0pB1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: ABC_tran | ECOD (v294.1) |
| B | DNA_pol_B_exo1 | e4i0pB2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Hemagglutinin HA2 chain | T: Hemagglutinin HA2 chain | F: DNA_pol_B_exo1 | ECOD (v294.1) |
| F | Peptidase_M4,Peptidase_M4_C | e4i0pF1 | A: a/b three-layered sandwiches | X: Globin-like | H: Ring-building motif I in type III secretion system | T: Ring-building motif I in type III secretion system | F: Peptidase_M4,Peptidase_M4_C | ECOD (v294.1) |
| F | DNA_pol_B_exo1 | e4i0pF2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Hemagglutinin HA2 chain | T: Hemagglutinin HA2 chain | F: DNA_pol_B_exo1 | ECOD (v294.1) |
| C | Peptidase_M4,Peptidase_M4_C | e4i0pC1 | A: a/b three-layered sandwiches | X: Globin-like | H: Ring-building motif I in type III secretion system | T: Ring-building motif I in type III secretion system | F: Peptidase_M4,Peptidase_M4_C | ECOD (v294.1) |
| G | SmpA_OmlA | e4i0pG1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: SmpA_OmlA | ECOD (v294.1) |
| D | SmpA_OmlA | e4i0pD1 | A: a/b three-layered sandwiches | X: beta-Grasp | H: HTH | T: winged helix domain | F: SmpA_OmlA | ECOD (v294.1) |
| D | DNA_pol_B_exo1 | e4i0pD2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Hemagglutinin HA2 chain | T: Hemagglutinin HA2 chain | F: DNA_pol_B_exo1 | ECOD (v294.1) |
| H | Peptidase_M4,Peptidase_M4_C | e4i0pH1 | A: a/b three-layered sandwiches | X: Globin-like | H: Ring-building motif I in type III secretion system | T: Ring-building motif I in type III secretion system | F: Peptidase_M4,Peptidase_M4_C | ECOD (v294.1) |
| H | DNA_pol_B_exo1 | e4i0pH2 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Hemagglutinin HA2 chain | T: Hemagglutinin HA2 chain | F: DNA_pol_B_exo1 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| MH2 HLA-DOA*0101_HLA-DOB*0101 | II-ALPHA | Homo sapiens (human) | HLA-DMA*0101 | G-DOMAIN G-ALPHA, C-LIKE-DOMAIN C-LIKE | MH | MH2-ALPHA_BETA | IMGT (202614-0) | |
| MH2 HLA-DOA*0101_HLA-DOB*0101 | II-BETA | Homo sapiens (human) | HLA-DMB*0101 | G-DOMAIN G-BETA, C-LIKE-DOMAIN C-LIKE | MH | MH2-ALPHA_BETA | IMGT (202614-0) | |
| MH2 HLA-DMA*0101_HLA-DMB*0101 | II-ALPHA | Homo sapiens (human) | HLA-DOA*0101 | G-DOMAIN G-ALPHA, C-LIKE-DOMAIN C-LIKE | MH | MH2-ALPHA_BETA | IMGT (202614-0) | |
| MH2 HLA-DMA*0101_HLA-DMB*0101 | II-BETA | Homo sapiens (human) | HLA-DOB*0101, HLA-DOB*0102, HLA-DOB*0103, HLA-DOB*0104 | G-DOMAIN G-BETA, C-LIKE-DOMAIN C-LIKE | MH | MH2-ALPHA_BETA | IMGT (202614-0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00969 | Class II histocompatibility antigen, beta domain (MHC_II_beta) | Class II histocompatibility antigen, beta domain | Domain | ||
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | ||
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain | ||
| PF00993 | Class II histocompatibility antigen, alpha domain (MHC_II_alpha) | Class II histocompatibility antigen, alpha domain | Domain | ||
| PF00969 | Class II histocompatibility antigen, beta domain (MHC_II_beta) | Class II histocompatibility antigen, beta domain | Domain | ||
| PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | Domain |














