4HS2 | pdb_00004hs2

Crystal Structure of the Human SPOP C-terminal Domain


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ABACKe4hs2A1 A: alpha superhelicesX: Repetitive alpha hairpinsH: BACK domain (From Topology)T: BACK domainF: BACKECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.25.40.420 Mainly Alpha Alpha Horseshoe Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF24570BPM/SPOP, BACK domain (BACK_BPM_SPOP)BPM/SPOP, BACK domainThis entry represent the BACK domain present in BPM proteins from plants, SPOP from animals and related sequences. BPM proteins are part of the Cullin E3 ubiquitin ligase complexes playing a role as substrate-specific adaptors of CUL3-based E3 ligase ...This entry represent the BACK domain present in BPM proteins from plants, SPOP from animals and related sequences. BPM proteins are part of the Cullin E3 ubiquitin ligase complexes playing a role as substrate-specific adaptors of CUL3-based E3 ligases in the ubiquitin-proteasome pathway [1,2]. They bind at least three families of transcription factors: ERF/AP2 class I, homeobox-leucine zipper and R2R3 MYB, playing an important role in plant flowering, seed development and abiotic stress response [1]. SPOP, also known as HIB homologue 1 or Roadkill homologue 1 in humans, is an adaptor protein that forms a complex with Cul3, cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex, and is involved in ubiquitination of BMI1, H2AFY, and the death-associated protein 6 (DAXX) [4-6]. This domain is involved in dimerization together with the BTB domain (Pfam:PF00651), resulting in linear higher-order oligomers [7].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Speckle-type POZ protein

InterPro: Protein Family Classification InterPro Database Homepage