4HBC

Crystal structure of a conformation-dependent rabbit IgG Fab specific for amyloid prefibrillar oligomers

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
B [auth L]d4hbcl1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches rabbit (Oryctolagus cuniculus ) [TaxId: 9986 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth H]PF07654e4hbcH2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
A [auth H]PF07686e4hbcH1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)
B [auth L]PF07654e4hbcL2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07654ECOD (1.6)
B [auth L]PF07686e4hbcL1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF07686ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A [auth H]ANTIGEN BINDING FRAGMENT, IMMUNOGLOBULIN IGG VH-CH1 Oryctolagus cuniculus (rabbit) IGHV1S69*01, IGHJ3*01, IGHJ2*01, IGHJ4*01, IGHJ2*02, IGHG*01, IGHG*05, IGHG*02 V-DOMAIN VH, C-DOMAIN CH1 IG (L-KAPPA_VH-CH1) IMGT (202416-0)
B [auth L]ANTIGEN BINDING FRAGMENT, IMMUNOGLOBULIN IGG L-KAPPA Oryctolagus cuniculus (rabbit) IGKV1S3*02, IGKJ1-2*02, IGKJ1-2*01, IGKC1*02 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG (L-KAPPA_VH-CH1) IMGT (202416-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth H]Heavy ChainIGHV1 --SAbDab (2024-04-26)
B [auth L]Light ChainIGKV1 Kappa-SAbDab (2024-04-26)