Annotations: 4GN1

Crystal Structure of the RA and PH domains of Lamellipodin

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	DZF_C	e4gn1D3	A: alpha arrays	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: DZF_C	ECOD (v295)
C	DZF_C	e4gn1C3	A: alpha arrays	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: DZF_C	ECOD (v295)
B	DZF_C	e4gn1B3	A: alpha arrays	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: DZF_C	ECOD (v295)
A	ABC_tran	e4gn1A1	A: alpha arrays	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.10.20.90	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Phosphatidylinositol 3-kinase Catalytic Subunit	CATH (4.3.0)
D	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)
C	3.10.20.90	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Phosphatidylinositol 3-kinase Catalytic Subunit	CATH (4.3.0)
C	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)
B	3.10.20.90	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Phosphatidylinositol 3-kinase Catalytic Subunit	CATH (4.3.0)
B	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)
A	3.10.20.90	Alpha Beta	Roll	Ubiquitin-like (UB roll)	Phosphatidylinositol 3-kinase Catalytic Subunit	CATH (4.3.0)
A	2.30.29.30	Mainly Beta	Roll	PH-domain like	Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF21989	RA like domain (RA_2)	RA like domain		Domain
A, B, C, D	PF00169	PH domain (PH)	PH domain	PH stands for pleckstrin homology.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Ras-associated and pleckstrin homology domains-containing protein 1	protein-macromolecule adaptor activity molecular adaptor activity	cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction intracellular signal transduction cell communication developmental process cellular component organization anatomical structure morphogenesis cell projection morphogenesis cellular response to stimulus regulation of biological process regulation of cellular process response to stimulus signaling biological regulation cellular process signal transduction intracellular signal transduction cell communication developmental process cellular component organization anatomical structure morphogenesis cell projection morphogenesis cell projection organization anatomical structure development cellular component organization or biogenesis cell morphogenesis	cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium intracellular organelle intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle cytoplasm cytosol cell periphery cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium intracellular organelle intracellular anatomical structure cytoskeleton organelle membraneless organelle intracellular membraneless organelle cytoplasm cytosol cell periphery plasma membrane membrane actin cytoskeleton actin-based cell projection filopodium

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001849	Pleckstrin homology domain	Domain
A, B, C, D	IPR000159	Ras-associating domain	Domain
A, B, C, D	IPR039664	GRB/APBB1IP	Family
A, B, C, D	IPR039665	APBB1IP, PH domain	Domain
A, B, C, D	IPR011993	PH-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR029071	Ubiquitin-like domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D	: Q70E73	myopathy pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia pituitary cancer adrenal cortex carcinoma Unipolar Depression Crohn disease Emery-Dreifuss muscular dystrophy hydrolethalus syndrome large cell medulloblastoma malignant ependymoma malignant pancreatic neoplasm osteosarcoma pancreatic intraductal papillary-mucinous carcinoma peripheral nervous system disease myopathy pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia pituitary cancer adrenal cortex carcinoma Unipolar Depression Crohn disease Emery-Dreifuss muscular dystrophy hydrolethalus syndrome large cell medulloblastoma malignant ependymoma malignant pancreatic neoplasm osteosarcoma pancreatic intraductal papillary-mucinous carcinoma peripheral nervous system disease Sjogren syndrome amyotrophic lateral sclerosis diabetes mellitus facioscapulohumeral muscular dystrophy interstitial cystitis limb-girdle muscular dystrophy malignant glioma medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm peripheral neuropathy tuberculosis atypical teratoid rhabdoid tumor Duchenne muscular dystrophy gastric carcinoma juvenile dermatomyositis major depressive disorder

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