Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF18661e4fprA1 A: a+b two layersX: Alpha-beta plaitsH: Avirulence Effector AvrLm4-7 (From Topology)T: Avirulence Effector AvrLm4-7F: PF18661ECOD (1.6)
BPF18661e4fprB1 A: a+b two layersX: Alpha-beta plaitsH: Avirulence Effector AvrLm4-7 (From Topology)T: Avirulence Effector AvrLm4-7F: PF18661ECOD (1.6)
CPF18661e4fprC1 A: a+b two layersX: Alpha-beta plaitsH: Avirulence Effector AvrLm4-7 (From Topology)T: Avirulence Effector AvrLm4-7F: PF18661ECOD (1.6)
DPF18661e4fprD1 A: a+b two layersX: Alpha-beta plaitsH: Avirulence Effector AvrLm4-7 (From Topology)T: Avirulence Effector AvrLm4-7F: PF18661ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.70.2910 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
B3.30.70.2910 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
C3.30.70.2910 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)
D3.30.70.2910 Alpha Beta 2-Layer Sandwich Alpha-Beta Plaits CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF18661Avirulence Effector AvrLm4-7 (AvrLm4-7)Avirulence Effector AvrLm4-7AvrLm4-7 is found in Leptosphaeria maculans, an ascomycete fungus in the dothideomycete group which is responsible for stem canker (blackleg) of Brassica napus (oilseed rape, OSR) and other crucifers. AvrLm4-7 is one of six avirulence genes which enc ...AvrLm4-7 is found in Leptosphaeria maculans, an ascomycete fungus in the dothideomycete group which is responsible for stem canker (blackleg) of Brassica napus (oilseed rape, OSR) and other crucifers. AvrLm4-7 is one of six avirulence genes which encodes a small secreted protein strongly over-expressed at the onset of plant infection. This gene confers a dual recognition specificity by two distinct resistance genes of OSR, Rlm4 and Rlm7 and loss of AvrLm4 avirulence was demonstrated to be associated with a strong fitness cost. Structure and functional analysis of AvrLm4-7 protein show that it contains the motifs RAWG and RYRE, part of a well-structured protein region held together by disulfide bridges. Mutations in the RAWG motif or in the RYRE motif (especially mutations in both motifs) almost abolished the translocation of AvrLm4-7 into cells. Furthermore, loss of recognition of AvrLm4-7 by Rlm4 is caused by the mutation of a single glycine to an arginine residue located in a loop of the protein [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR040621Avirulence Effector AvrLm4-7Domain