Crystal Structure of the UT-B Urea Transporter from Bos Taurus
External Resource: Annotation
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | Ammonium transporter | 8055962 | 3001978 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Ammonium transporter | 8055962 | 3001978 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | Urea transporter | 8051264 | 4007272 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Ammonium transporter | 8055962 | 3001978 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | ClpB_D2-small | e4ezcC1 | A: alpha bundles | X: YrdC/RibB | H: SH3 | T: SH3 | F: ClpB_D2-small | ECOD (develop294) |
| B | ClpB_D2-small | e4ezcB1 | A: alpha bundles | X: YrdC/RibB | H: SH3 | T: SH3 | F: ClpB_D2-small | ECOD (develop294) |
| A | TIM | e4ezcA1 | A: alpha bundles | X: Flavodoxin-like | H: SH3 | T: SH3 | F: TIM | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 1.10.3430.10 | Mainly Alpha | Orthogonal Bundle | Ammonium transporter fold | Ammonium transporter AmtB like domains | CATH (4.3.0) |
| B | 1.10.3430.10 | Mainly Alpha | Orthogonal Bundle | Ammonium transporter fold | Ammonium transporter AmtB like domains | CATH (4.3.0) |
| A | 1.10.3430.10 | Mainly Alpha | Orthogonal Bundle | Ammonium transporter fold | Ammonium transporter AmtB like domains | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03253 | Urea transporter (UT) | Urea transporter | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Urea transporter 1 |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR004937 | Urea transporter | Family | |
| IPR029020 | Ammonium/urea transporter | Homologous Superfamily |
Membrane Protein Annotation: OPM OPM Database Homepage
| Chains | External Link | Type | Class | Superfamily | Family |
|---|---|---|---|---|---|
| OPM | Transmembrane | Alpha-helical polytopic | Ammonia/urea transporters/Na+ exporter | Urea transporter |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Urea Transporters | UT-B Urea Transporter |
