4EX4 | pdb_00004ex4

The Structure of GlcB from Mycobacterium leprae

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d4ex4b_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Malate synthase G	Malate synthase G	automated matches	(Mycobacterium leprae Br4923 ) [TaxId: 561304 ],	SCOPe (2.08)
A	d4ex4a_	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Malate synthase G	Malate synthase G	automated matches	(Mycobacterium leprae Br4923 ) [TaxId: 561304 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Malate synthase G	8080524	3000549	SCOP2B (2022-06-29)
A	SCOP2 Family	Malate synthase G	8080523	4003285	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Malate synthase G	8080524	3000549	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	Malate_synthase	e4ex4B1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Malate_synthase	ECOD (1.6)
A	Malate_synthase	e4ex4A2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: Malate_synthase	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.20.20.360	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Malate synthase, domain 3	CATH (4.3.0)
B	2.170.170.11	Mainly Beta	Beta Complex	Malate synthase G - maily-beta sub-domain	Malate synthase G - maily-beta sub-domain	CATH (4.3.0)
B	1.20.1220.12	Mainly Alpha	Up-down Bundle	Malate Synthase G	Chain: A	CATH (4.3.0)
A	3.20.20.360	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Malate synthase, domain 3	CATH (4.3.0)
A	1.20.1220.12	Mainly Alpha	Up-down Bundle	Malate Synthase G	Chain: A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Malate synthase G	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding acyltransferase activity acyltransferase activity, acyl groups converted into alkyl on transfer transferase activity malate synthase activity catalytic activity	aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds primary metabolic process metabolic process cellular process generation of precursor metabolites and energy carbohydrate metabolic process glyoxylate metabolic process glyoxylate cycle oxoacid metabolic process carboxylic acid metabolic process organic acid metabolic process aerobic respiration cellular respiration tricarboxylic acid cycle energy derivation by oxidation of organic compounds primary metabolic process metabolic process cellular process generation of precursor metabolites and energy carbohydrate metabolic process glyoxylate metabolic process glyoxylate cycle oxoacid metabolic process carboxylic acid metabolic process organic acid metabolic process aldehyde metabolic process small molecule metabolic process monocarboxylic acid metabolic process catabolic process organic acid catabolic process monocarboxylic acid catabolic process carboxylic acid catabolic process glyoxylate catabolic process aldehyde catabolic process small molecule catabolic process	cell surface cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR006253	Malate synthase G	Family
A, B	IPR046363	Malate synthase, N-terminal and TIM-barrel domains	Homologous Superfamily
A, B	IPR048356	Malate synthase, N-terminal domain	Domain
A, B	IPR011076	Malate synthase superfamily	Homologous Superfamily
A, B	IPR001465	Malate synthase, TIM barrel domain	Domain
A, B	IPR048357	Malate synthase G, alpha-beta insertion domain	Domain
A, B	IPR048355	Malate synthase, C-terminal domain	Domain
A, B	IPR044856	Malate synthase, C-terminal superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.