4EN8

Crystal structure of HA70 (HA3) subcomponent of Clostridium botulinum type C progenitor toxin in complex with alpha 2-6-sialyllactose


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AClenterotox_Ne4en8A1 A: beta complex topologyX: Aerolysin family of pore-forming toxins (From Topology)H: Aerolysin family of pore-forming toxins (From Topology)T: Aerolysin family of pore-forming toxinsF: Clenterotox_NECOD (1.6)
BEUF07615e4en8B2 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: EUF07615ECOD (1.6)
BClenterotox_Ce4en8B1 A: beta sandwichesX: jelly-rollH: Concanavalin A-likeT: Galactose-binding domain-likeF: Clenterotox_CECOD (1.6)
BClenterotox_Ne4en8B3 A: beta complex topologyX: Aerolysin family of pore-forming toxins (From Topology)H: Aerolysin family of pore-forming toxins (From Topology)T: Aerolysin family of pore-forming toxinsF: Clenterotox_NECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.170.15.20 Mainly Beta Beta Complex Proaerolysin Chain A, domain 3CATH (4.3.0)
B2.170.15.20 Mainly Beta Beta Complex Proaerolysin Chain A, domain 3CATH (4.3.0)
B2.60.120.1080 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)
B2.60.120.1090 Mainly Beta Sandwich Jelly Rolls CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03505Clostridium enterotoxin (Clenterotox)Clostridium enterotoxin- Family
PF03505Clostridium enterotoxin (Clenterotox)Clostridium enterotoxin- Family
PF17993Haemagglutinin 70 C-terminal domain (HA70_C)Haemagglutinin 70 C-terminal domainThis is the C-terminal domain found in hemagglutinin component such as HA70 found in Clostridium botulinum. HA is a component of the large botulinum neurotoxin complex and is critical for its oral toxicity. HA plays multiple roles in toxin penetratio ...This is the C-terminal domain found in hemagglutinin component such as HA70 found in Clostridium botulinum. HA is a component of the large botulinum neurotoxin complex and is critical for its oral toxicity. HA plays multiple roles in toxin penetration in the gastrointestinal tract, including protection from the digestive environment, binding to the intestinal mucosal surface, and disruption of the epithelial barrier [1]. HA consists of three different proteins, designated HA70 (also known as HA3), HA33 (HA1), and HA17 (HA2) based on molecular mass [2]. HA70 consists of three domains (D1-3). The D1 and D2 domains, which adopt similar structures, mediate the trimerization of HA70 with each protomer. The D3 domain, sitting at the tip of the trimer, is composed of two similar jelly-roll-like beta-sandwich structures [3]. Furthermore, crystal structures of HA70 in a complex with alpha2,3- or alpha2,6-SiaLac (alpha2,6-sialyllactose), show that alpha2,3- and alpha2,6-SiaLac bound to the same region in the D3 domain of HA70. This domain is the D3 domain found in HA3/HA70 which has been shown to be involved in binding to carbohydrate of glycoproteins from epithelial cells in the infection process [2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Hemagglutinin components HA-22/23/53- -
Hemagglutinin components HA-22/23/53- -