4E6K
2.0 A resolution structure of Pseudomonas aeruginosa bacterioferritin (BfrB) in complex with bacterioferritin associated ferredoxin (Bfd)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4e6ka_ | All alpha proteins | Ferritin-like | Ferritin-like | Ferritin | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
B | d4e6kb_ | All alpha proteins | Ferritin-like | Ferritin-like | Ferritin | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
C | d4e6kc_ | All alpha proteins | Ferritin-like | Ferritin-like | Ferritin | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
D | d4e6kd_ | All alpha proteins | Ferritin-like | Ferritin-like | Ferritin | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
E | d4e6ke_ | All alpha proteins | Ferritin-like | Ferritin-like | Ferritin | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
F | d4e6kf_ | All alpha proteins | Ferritin-like | Ferritin-like | Ferritin | automated matches | (Pseudomonas aeruginosa PAO1 ) [TaxId: 208964 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ferritin-like | 8075758 | 3001658 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ferritin-like | 8075758 | 3001658 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ferritin-like | 8075758 | 3001658 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ferritin-like | 8075758 | 3001658 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | Ferritin-like | 8075758 | 3001658 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Ferritin-like | 8075758 | 3001658 | SCOP2B (2022-06-29) |
G | SCOP2 Family | Bfd-like | 8045736 | 4004649 | SCOP2 (2022-06-29) |
G | SCOP2 Superfamily | Bfd-like | 8091738 | 3002540 | SCOP2 (2022-06-29) |
I | SCOP2B Superfamily | Bfd-like | 8091738 | 3002540 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00210 | e4e6kA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: PF00210 | ECOD (1.6) |
B | PF00210 | e4e6kB1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: PF00210 | ECOD (1.6) |
C | PF00210 | e4e6kC1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: PF00210 | ECOD (1.6) |
D | PF00210 | e4e6kD1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: PF00210 | ECOD (1.6) |
E | PF00210 | e4e6kE1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: PF00210 | ECOD (1.6) |
F | PF00210 | e4e6kF1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Ferritin | F: PF00210 | ECOD (1.6) |
G | PF04324 | e4e6kG1 | A: alpha arrays | X: HTH | H: bacterioferritin-associated ferredoxin (From Topology) | T: bacterioferritin-associated ferredoxin | F: PF04324 | ECOD (1.6) |
H | PF04324 | e4e6kH2 | A: alpha arrays | X: HTH | H: bacterioferritin-associated ferredoxin (From Topology) | T: bacterioferritin-associated ferredoxin | F: PF04324 | ECOD (1.6) |
I | PF04324 | e4e6kI1 | A: alpha arrays | X: HTH | H: bacterioferritin-associated ferredoxin (From Topology) | T: bacterioferritin-associated ferredoxin | F: PF04324 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.20.1260.10 | Mainly Alpha | Up-down Bundle | Ferritin | Ferritin, core subunit, four-helix bundle | CATH (4.3.0) |
B | 1.20.1260.10 | Mainly Alpha | Up-down Bundle | Ferritin | Ferritin, core subunit, four-helix bundle | CATH (4.3.0) |
C | 1.20.1260.10 | Mainly Alpha | Up-down Bundle | Ferritin | Ferritin, core subunit, four-helix bundle | CATH (4.3.0) |
D | 1.20.1260.10 | Mainly Alpha | Up-down Bundle | Ferritin | Ferritin, core subunit, four-helix bundle | CATH (4.3.0) |
E | 1.20.1260.10 | Mainly Alpha | Up-down Bundle | Ferritin | Ferritin, core subunit, four-helix bundle | CATH (4.3.0) |
F | 1.20.1260.10 | Mainly Alpha | Up-down Bundle | Ferritin | Ferritin, core subunit, four-helix bundle | CATH (4.3.0) |
G | 1.10.10.1100 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | BFD-like [2Fe-2S]-binding domain | CATH (4.3.0) |
I | 1.10.10.1100 | Mainly Alpha | Orthogonal Bundle | Arc Repressor Mutant, subunit A | BFD-like [2Fe-2S]-binding domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00210 | Ferritin-like domain (Ferritin) | Ferritin-like domain | This family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins. | Domain | |
PF04324 | BFD-like [2Fe-2S] binding domain (Fer2_BFD) | BFD-like [2Fe-2S] binding domain | The two Fe ions are each coordinated by two conserved cysteine residues. This domain occurs alone in small proteins such as Bacterioferritin-associated ferredoxin (BFD, Swiss:P13655). The function of BFD is not known, but it may may be a general redo ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009040 | Ferritin-like diiron domain | Domain | |
IPR002024 | Bacterioferritin | Family | |
IPR012347 | Ferritin-like | Homologous Superfamily | |
IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
IPR008331 | Ferritin/DPS protein domain | Domain | |
IPR041854 | BFD-like [2Fe-2S]-binding domain superfamily | Homologous Superfamily | |
IPR007419 | BFD-like [2Fe-2S]-binding domain | Domain |