4E4F | pdb_00004e4f

Crystal structure of enolase PC1_0802 (TARGET EFI-502240) from Pectobacterium carotovorum subsp. carotovorum PC1

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d4e4fd2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	D-glucarate dehydratase-like	automated matches	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
D	d4e4fd1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
D	d4e4fd3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
C	d4e4fc2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	D-glucarate dehydratase-like	automated matches	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
C	d4e4fc1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
C	d4e4fc3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
B	d4e4fb2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	D-glucarate dehydratase-like	automated matches	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
B	d4e4fb1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
B	d4e4fb3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
A	d4e4fa2	Alpha and beta proteins (a/b)	TIM beta/alpha-barrel	Enolase C-terminal domain-like	D-glucarate dehydratase-like	automated matches	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
A	d4e4fa1	Alpha and beta proteins (a+b)	Enolase N-terminal domain-like	Enolase N-terminal domain-like	automated matches	automated matches	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)
A	d4e4fa3	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Pectobacterium carotovorum subsp. carotovorum PC1 ) [TaxId: 561230 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	tRNA_anti-codon	e4e4fD5	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: tRNA_anti-codon	ECOD (v294.1)
C	MR_MLE_C	e4e4fC3	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: MR_MLE_C	ECOD (v294.1)
B	MR_MLE_C	e4e4fB3	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase	F: MR_MLE_C	ECOD (v294.1)
A	Plexin_RBD	e4e4fA1	A: a/b three-layered sandwiches	X: cradle loop barrel	H: RIFT-related	T: acid protease	F: Plexin_RBD	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
D	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
C	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
C	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
B	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
B	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)
A	3.30.390.10	Alpha Beta	2-Layer Sandwich	Enolase-like	domain 1	CATH (4.3.0)
A	3.20.20.120	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Enolase-like C-terminal domain	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	MANNONATE DEHYDRATASE	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding mannonate dehydratase activity hydro-lyase activity lyase activity catalytic activity carbon-oxygen lyase activity	catabolic process metabolic process cellular process amino acid metabolic process primary metabolic process amino acid catabolic process carbohydrate metabolic process carbohydrate catabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR034589	D-mannonate dehydratase-like	Family
A, B, C, D	IPR034593	D-galactonate dehydratase DgoD-like	Family
A, B, C, D	IPR029065	Enolase_C-like	Unknown
A, B, C, D	IPR018110	Mandelate racemase/muconate lactonizing enzyme, conserved site	Conserved Site
A, B, C, D	IPR013342	Mandelate racemase, C-terminal domain	Domain
A, B, C, D	IPR029017	Enolase-like, N-terminal	Homologous Superfamily
A, B, C, D	IPR036849	Enolase-like, C-terminal domain superfamily	Homologous Superfamily
A, B, C, D	IPR013341	Mandelate racemase, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.