4E38
Crystal structure of probable keto-hydroxyglutarate-aldolase from Vibrionales bacterium SWAT-3 (Target EFI-502156)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4e38a1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | automated matches | automated matches | (Vibrionales bacterium SWAT-3 ) [TaxId: 391574 ], | SCOPe (2.08) |
A | d4e38a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Vibrionales bacterium SWAT-3 ) [TaxId: 391574 ], | SCOPe (2.08) |
B | d4e38b1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | automated matches | automated matches | (Vibrionales bacterium SWAT-3 ) [TaxId: 391574 ], | SCOPe (2.08) |
B | d4e38b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Vibrionales bacterium SWAT-3 ) [TaxId: 391574 ], | SCOPe (2.08) |
C | d4e38c1 | Alpha and beta proteins (a/b) | TIM beta/alpha-barrel | Aldolase | automated matches | automated matches | (Vibrionales bacterium SWAT-3 ) [TaxId: 391574 ], | SCOPe (2.08) |
C | d4e38c2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Vibrionales bacterium SWAT-3 ) [TaxId: 391574 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01081 | e4e38A1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01081 | ECOD (1.6) |
B | PF01081 | e4e38B1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01081 | ECOD (1.6) |
C | PF01081 | e4e38C1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF01081 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
B | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
C | 3.20.20.70 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Aldolase class I | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01081 | KDPG and KHG aldolase (Aldolase) | KDPG and KHG aldolase | This family includes the following members: 4-hydroxy-2-oxoglutarate aldolase (KHG-aldolase) Phospho-2-dehydro-3-deoxygluconate aldolase (KDPG-aldolase) | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR031338 | KDPG/KHG aldolase, active site 2 | Active Site | |
IPR000887 | KDPG/KHG aldolase | Family | |
IPR013785 | Aldolase-type TIM barrel | Homologous Superfamily | |
IPR031337 | KDPG/KHG aldolase, active site 1 | Active Site |