4DYC | pdb_00004dyc

Crystal Structure of the terminase small subunit gp1 with D19R mutation of the bacterial virus sf6

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2 Familyphage Sf6 small terminase subunit-like 8101728 4007774 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyHomeodomain-like 8101729 3000001 SCOP2 (2022-06-29)
ASCOP2B SuperfamilyHomeodomain-like 8101729 3000001 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BResolvasee4dycB2 A: a/b three-layered sandwichesX: Subtilisin-likeH: Subtilisin-likeT: Subtilisin-likeF: ResolvaseECOD (v294.1)
ASRP_SPBe4dycA2 A: a/b three-layered sandwichesX: Fusion glycoprotein F2H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseT: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymeraseF: SRP_SPBECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.10.60 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Homeodomain-likeCATH (4.3.0)
A1.10.10.60 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Homeodomain-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF20901Bacteriophage Sf6, terminase small subunit-like (Sf6_terminase)Bacteriophage Sf6, terminase small subunit-like- Family

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR048683Bacteriophage Sf6, terminase small subunit-likeFamily