4DCI | pdb_00004dci

Crystal structure of unknown funciton protein from Synechococcus sp. WH 8102

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2 Family	YlqD-like	8045885	4004740	SCOP2 (2022-06-29)
H	SCOP2 Superfamily	YlqD-like	8092326	3002587	SCOP2 (2022-06-29)
G	SCOP2B Superfamily	YlqD-like	8092326	3002587	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	YlqD-like	8092326	3002587	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	YlqD-like	8092326	3002587	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	YlqD-like	8092326	3002587	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	YlqD-like	8092326	3002587	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	YlqD-like	8092326	3002587	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	YlqD-like	8092326	3002587	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	YlqD	e4dciH1	A: alpha bundles	X: uncharacterized protein SYNW0670 (From Topology)	H: uncharacterized protein SYNW0670 (From Topology)	T: uncharacterized protein SYNW0670	F: YlqD	ECOD (1.6)
G	YlqD	e4dciG1	A: alpha bundles	X: uncharacterized protein SYNW0670 (From Topology)	H: uncharacterized protein SYNW0670 (From Topology)	T: uncharacterized protein SYNW0670	F: YlqD	ECOD (1.6)
F	YlqD	e4dciF1	A: alpha bundles	X: uncharacterized protein SYNW0670 (From Topology)	H: uncharacterized protein SYNW0670 (From Topology)	T: uncharacterized protein SYNW0670	F: YlqD	ECOD (1.6)
E	YlqD	e4dciE1	A: alpha bundles	X: uncharacterized protein SYNW0670 (From Topology)	H: uncharacterized protein SYNW0670 (From Topology)	T: uncharacterized protein SYNW0670	F: YlqD	ECOD (1.6)
D	YlqD	e4dciD1	A: alpha bundles	X: uncharacterized protein SYNW0670 (From Topology)	H: uncharacterized protein SYNW0670 (From Topology)	T: uncharacterized protein SYNW0670	F: YlqD	ECOD (1.6)
C	YlqD	e4dciC1	A: alpha bundles	X: uncharacterized protein SYNW0670 (From Topology)	H: uncharacterized protein SYNW0670 (From Topology)	T: uncharacterized protein SYNW0670	F: YlqD	ECOD (1.6)
B	YlqD	e4dciB1	A: alpha bundles	X: uncharacterized protein SYNW0670 (From Topology)	H: uncharacterized protein SYNW0670 (From Topology)	T: uncharacterized protein SYNW0670	F: YlqD	ECOD (1.6)
A	YlqD	e4dciA1	A: alpha bundles	X: uncharacterized protein SYNW0670 (From Topology)	H: uncharacterized protein SYNW0670 (From Topology)	T: uncharacterized protein SYNW0670	F: YlqD	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	6.10.140.1110	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
G	6.10.140.1110	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
F	6.10.140.1110	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
E	6.10.140.1110	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
D	6.10.140.1110	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
C	6.10.140.1110	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
B	6.10.140.1110	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)
A	6.10.140.1110	Special	Helix non-globular	Helix Hairpins		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF11068	YlqD protein (YlqD)	YlqD protein	-	Family

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR021297	YlqD protein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.