Crystal structure of Bacillus thuringiensis Cry5B nematocidal toxin
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Endotoxin_C | e4d8mA1 | A: beta sandwiches | X: jelly-roll | H: Concanavalin A-like | T: Galactose-binding domain-like | F: Endotoxin_C | ECOD (1.6) |
| A | EUF07870 | e4d8mA7 | A: beta duplicates or obligate multimers | X: beta-Prism I (From Topology) | H: beta-Prism I (From Topology) | T: beta-Prism I | F: EUF07870 | ECOD (1.6) |
| A | Endotoxin_N | e4d8mA6 | A: alpha arrays | X: Toxins' membrane translocation domains | H: delta-Endotoxin (insectocide), N-terminal domain (From Topology) | T: delta-Endotoxin (insectocide), N-terminal domain | F: Endotoxin_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 1.20.190.10 | Mainly Alpha | Up-down Bundle | Delta-Endotoxin | domain 1 | CATH (4.3.0) |
| A | 2.60.120.260 | Mainly Beta | Sandwich | Jelly Rolls | Galactose-binding domain-like | CATH (4.3.0) |
| A | 2.100.10.40 | Mainly Beta | Aligned Prism | Vitelline Membrane Outer Layer Protein I, subunit A | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR041587 | Pesticidal crystal protein Cry, domain V | Domain | |
| IPR005638 | Pesticidal crystal protein, domain III | Domain | |
| IPR008979 | Galactose-binding-like domain superfamily | Homologous Superfamily | |
| IPR038979 | Pesticidal crystal protein | Family | |
| IPR036716 | Pesticidal crystal protein, N-terminal domain superfamily | Homologous Superfamily | |
| IPR005639 | Pesticidal crystal protein, domain I | Domain |














