4D6J
Crystal structure of a family 98 glycoside hydrolase catalytic module (Sp3GH98) in complex with the type 2 blood group A-tetrasaccharide (E558A X01 mutant)
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d4d6ja2 | All beta proteins | Hyaluronate lyase-like, C-terminal domain | Glycosyl hydrolase family 98 C-terminal domain-like | automated matches | automated matches | (Streptococcus pneumoniae SP3-BS71 ) [TaxId: 406556 ], | SCOPe (2.08) |
| A | d4d6ja1 | Alpha and beta proteins (a/b) | P-loop containing nucleoside triphosphate hydrolases | P-loop containing nucleoside triphosphate hydrolases | automated matches | automated matches | (Streptococcus pneumoniae SP3-BS71 ) [TaxId: 406556 ], | SCOPe (2.08) |
| A | d4d6ja3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Streptococcus pneumoniae SP3-BS71 ) [TaxId: 406556 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | PF08307 | e4d6jA3 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: Hyaluronate lyase-like, C-terminal domain (From Topology) | T: Hyaluronate lyase-like, C-terminal domain | F: PF08307 | ECOD (1.6) |
| A | PF08306 | e4d6jA1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: PF08306 | ECOD (1.6) |
| A | PF08307 | e4d6jA2 | A: a/b three-layered sandwiches | X: a/b domain in family 98 glycoside hydrolases (From Topology) | H: a/b domain in family 98 glycoside hydrolases (From Topology) | T: a/b domain in family 98 glycoside hydrolases | F: PF08307 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.20.20.80 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Glycosidases | CATH (4.3.0) |
| A | 3.30.2330.20 | Alpha Beta | 2-Layer Sandwich | arginine biosynthesis bifunctional protein fold | family 98 glycoside hydrolase | CATH (4.3.0) |
| A | 2.60.220.10 | Mainly Beta | Sandwich | Chondroitinase Ac | Chain A, domain 3 | CATH (4.3.0) |
