Annotations: 4CE4

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Q [auth O]	SCOP2 Family	Ribosomal protein L14	8072067	4001826	SCOP2 (2022-06-29)
Q [auth O]	SCOP2 Superfamily	50S Ribosomal protein L14-like	8072068	3000433	SCOP2 (2022-06-29)
R [auth P]	SCOP2 Family	Ribosomal proteins L15p and L18e	8089119	4003555	SCOP2 (2022-06-29)
R [auth P]	SCOP2 Superfamily	Ribosomal proteins L15p and L18e	8089120	3001045	SCOP2 (2022-06-29)
S [auth Q]	SCOP2 Family	Ribosomal protein L16p	8076054	4003717	SCOP2 (2022-06-29)
S [auth Q]	SCOP2 Superfamily	Ribosomal protein L16p/L10e	8076055	3000884	SCOP2 (2022-06-29)
V [auth T]	SCOP2 Family	Ribosomal protein L19	8089131	4001761	SCOP2 (2022-06-29)
V [auth T]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8089132	3000334	SCOP2 (2022-06-29)
Y [auth W]	SCOP2 Family	Ribosomal protein L22	8081521	4001212	SCOP2 (2022-06-29)
Y [auth W]	SCOP2 Superfamily	Ribosomal protein L22	8081522	3001078	SCOP2 (2022-06-29)
AA [auth Y]	SCOP2 Family	Ribosomal proteins L24p and L21e	8082518	4001752	SCOP2 (2022-06-29)
AA [auth Y]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8082519	3000334	SCOP2 (2022-06-29)
X [auth V]	SCOP2 Family	Ribosomal protein l21p	8082450	4001630	SCOP2 (2022-06-29)
X [auth V]	SCOP2 Superfamily	l21p-like	8082451	3002005	SCOP2 (2022-06-29)
O [auth I]	SCOP2 Family	Ribosomal protein L9 N-domain	8070578	4001757	SCOP2 (2022-06-29)
O [auth I]	SCOP2 Superfamily	L9 N-domain-like	8070579	3000338	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth 0]	Docking	e4ce401	A: alpha bundles	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: Docking	ECOD (develop294)
C [auth 2]	Ribosomal_L17	e4ce421	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
D [auth 3]	LRR_adjacent	e4ce431	A: alpha bundles	X: Lipocalins/Streptavidin	H: Fibronectin type I module-like	T: Fibronectin type I module	F: LRR_adjacent	ECOD (develop294)
E [auth 5]	Ribosomal_L17	e4ce451	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
G [auth 7]	Ribosomal_L17	e4ce471	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
H [auth 8]	Ribosomal_L17	e4ce481	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
I [auth 9]	Ribosomal_L17	e4ce491	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
L [auth D]	Usp	e4ce4D1	A: alpha bundles	X: HAD domain-like	H: HAD domain-related	T: Toprim domain	F: Usp	ECOD (develop294)
M [auth E]	PemK_toxin	e4ce4E1	A: alpha bundles	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (develop294)
N [auth F]	Ribosomal_L17	e4ce4F1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
P [auth N]	Ribosomal_L17	e4ce4N1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
Q [auth O]	Ribosomal_L17	e4ce4O1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
R [auth P]	PemK_toxin	e4ce4P1	A: alpha bundles	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (develop294)
S [auth Q]	Ribosomal_L17	e4ce4Q1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
T [auth R]	Ribosomal_L17	e4ce4R1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)
V [auth T]	Tim44	e4ce4T1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Tim44	ECOD (develop294)
W [auth U]	Formyl_trans_N	e4ce4U1	A: alpha bundles	X: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit	H: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit	T: Fe-S cluster-binding domain in nickel-iron hydrogenase small subunit	F: Formyl_trans_N	ECOD (develop294)
Y [auth W]	Tim44	e4ce4W1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Tim44	ECOD (develop294)
Z [auth X]	Tim44	e4ce4X1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Tim44	ECOD (develop294)
AA [auth Y]	Tim44	e4ce4Y1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Tim44	ECOD (develop294)
BA [auth b]	Tim44	e4ce4b1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Tim44	ECOD (develop294)
EA [auth i]	Tim44	e4ce4i1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Tim44	ECOD (develop294)
FA [auth l]	DUF1968	e4ce4l1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: DUF1968	ECOD (develop294)
F [auth 6]	PemK_toxin	e4ce461	A: alpha bundles	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (develop294)
HA [auth u]	DUF1968	e4ce4u1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: DUF1968	ECOD (develop294)
DA [auth h]	RM44_endonuclase	e4ce4h1	A: alpha bundles	X: Single-stranded left-handed beta-helix	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: RM44_endonuclase	ECOD (develop294)
DA [auth h]	GIDA_C_1st	e4ce4h2	A: alpha bundles	X: Single-stranded left-handed beta-helix	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: GIDA_C_1st	ECOD (develop294)
CA [auth c]	Tim44	e4ce4c2	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Tim44	ECOD (develop294)
CA [auth c]		e4ce4c1	A: alpha bundles	X: Rossmann-like	H: Glycosyl hydrolase domain	T: Glycosyl hydrolase domain	F:	ECOD (develop294)
X [auth V]	Tim44	e4ce4V1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Tim44	ECOD (develop294)
U [auth S]	PemK_toxin	e4ce4S1	A: alpha bundles	X: SH3	H: SH3	T: SH3	F: PemK_toxin	ECOD (develop294)
B [auth 1]	Ribosomal_L28	e4ce411	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L28	ECOD (develop294)
O [auth I]	Ribosomal_L17	e4ce4I1	A: alpha bundles	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: Ribosomal_L17	ECOD (develop294)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
D [auth 3]	PF00327	Ribosomal protein L30p/L7e (Ribosomal_L30)	Ribosomal protein L30p/L7e	This family includes prokaryotic L30 and eukaryotic L7.	Domain
E [auth 5]	PF01783	Ribosomal L32p protein family (Ribosomal_L32p)	Ribosomal L32p protein family	-	Family
S [auth Q]	PF00252	Ribosomal protein L16p/L10e (Ribosomal_L16)	Ribosomal protein L16p/L10e		Domain
T [auth R]	PF01196	Ribosomal protein L17 (Ribosomal_L17)	Ribosomal protein L17	-	Family
V [auth T]	PF01245	Ribosomal protein L19 (Ribosomal_L19)	Ribosomal protein L19	-	Family
AA [auth Y]	PF17136	Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)	Large ribosomal subunit protein uL24, C-terminal domain	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...	This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].	Domain
AA [auth Y]	PF00467	KOW motif (KOW)	KOW motif	-	Family
X [auth V]	PF00829	Ribosomal prokaryotic L21 protein (Ribosomal_L21p)	Ribosomal prokaryotic L21 protein	-	Family
O [auth I]	PF04280	Tim44-like domain (Tim44)	Tim44-like domain	Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ...	Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostatic interactions and by penetrating the polar head group region [1]. This family includes the C-terminal region of Tim44 that has been shown to form a stable proteolytic fragment in yeast. This region is also found in a set of smaller bacterial proteins. The molecular function of the bacterial members of this family is unknown but transport seems likely. The crystal structure of the C terminal of Tim44 has revealed a large hydrophobic pocket which might play an important role in interacting with the acyl chains of lipid molecules in the mitochondrial membrane [3].	Domain
O [auth I]	PF01281	Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)	Ribosomal protein L9, N-terminal domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 0]	MRPL27	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
C [auth 2]	MRPL47	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
D [auth 3]	MRPL30	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex intracellular membraneless organelle ribosomal subunit ribonucleoprotein complex membraneless organelle ribosome large ribosomal subunit
E [auth 5]	MRPL32	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
G [auth 7]	MRPL34	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
H [auth 8]	MRPL35	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
I [auth 9]	MRPL36	-	-	-
J [auth A]	16S Ribosomal RNA	-	-	-
K [auth B]	UNASSIGNED RNA	-	-	-
L [auth D]	MRPL2	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle cellular anatomical structure organelle membrane organelle membrane protein-containing complex ribonucleoprotein complex intracellular organelle intracellular anatomical structure membraneless organelle intracellular membraneless organelle ribosome
M [auth E]	MRPL3	-	-	-
N [auth F]	MRPL4	-	-	-
P [auth N]	MRPL13	-	-	-
Q [auth O]	MRPL14	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
R [auth P]	MRPL15	-	-	-
S [auth Q]	MRPL16	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
T [auth R]	MRPL17	protein binding binding protein domain specific binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
V [auth T]	MRPL19	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane organelle membrane protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane organelle membrane protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
W [auth U]	MRPL20	-	-	-
Y [auth W]	MRPL22	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
Z [auth X]	MRPL23	structural molecule activity structural constituent of ribosome	mitochondrial translation primary metabolic process mitochondrial gene expression gene expression translation macromolecule biosynthetic process protein biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process protein metabolic process	membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome membrane-bounded organelle protein-containing complex intracellular anatomical structure mitochondrial large ribosomal subunit mitochondrion membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen intracellular organelle ribosomal subunit cellular anatomical structure organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle intracellular membrane-bounded organelle organelle lumen organelle ribonucleoprotein complex cytoplasm
AA [auth Y]	MRPL24	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane organelle membrane protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane organelle membrane protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
BA [auth b]	MRPL38	-	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle mitochondrial membrane organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle mitochondrial membrane organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope organelle mitochondrial envelope organelle membrane protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
EA [auth i]	MRPL45	-	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
FA [auth l]	MRPL49	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport establishment of localization rRNA transport transmembrane transport localization RNA import into mitochondrion establishment of RNA localization macromolecule localization cellular process RNA localization rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport establishment of localization rRNA transport transmembrane transport localization RNA import into mitochondrion establishment of RNA localization macromolecule localization cellular process RNA localization nucleobase-containing compound transport biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
GA [auth o]	MRPL52	-	-	-
IA [auth v], JA [auth w]	UNASSIGNED HELICES	-	-	-
KA [auth x]	THIOREDOXIN FOLD	-	-	-
F [auth 6]	MRPL33	-	-	-
LA [auth z]	UNASSIGNED HELICES	-	-	-
HA [auth u]	ICT1	hydrolase activity, acting on ester bonds catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid carboxylic ester hydrolase activity hydrolase activity catalytic activity, acting on a tRNA peptidyl-tRNA hydrolase activity catalytic activity translation factor activity translation release factor activity, codon nonspecific translation release factor activity translation termination factor activity	cellular component disassembly protein-containing complex organization mitochondrial translation protein-containing complex disassembly primary metabolic process translation gene expression mitochondrial gene expression protein biosynthetic process macromolecule biosynthetic process cellular component organization biosynthetic process mitochondrial translational termination cellular process cellular component disassembly protein-containing complex organization mitochondrial translation protein-containing complex disassembly primary metabolic process translation gene expression mitochondrial gene expression protein biosynthetic process macromolecule biosynthetic process cellular component organization biosynthetic process mitochondrial translational termination cellular process metabolic process translational termination cellular component organization or biogenesis protein metabolic process macromolecule metabolic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
DA [auth h]	MRPL44	RNA binding double-stranded RNA binding binding nucleic acid binding ribonuclease III activity double-stranded RNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity hydrolase activity, acting on ester bonds nuclease activity RNA binding double-stranded RNA binding binding nucleic acid binding ribonuclease III activity double-stranded RNA-specific ribonuclease activity endonuclease activity RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism catalytic activity, acting on RNA catalytic activity, acting on a nucleic acid RNA nuclease activity hydrolase activity hydrolase activity, acting on ester bonds nuclease activity RNA endonuclease activity catalytic activity	RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process RNA metabolic process primary metabolic process gene expression nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process RNA biosynthetic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process RNA processing macromolecule metabolic process mitochondrial translation mitochondrial gene expression translation protein biosynthetic process translational elongation mitochondrial translational elongation protein metabolic process	membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm membrane-bounded organelle mitochondrial membrane intracellular anatomical structure organelle inner membrane mitochondrion membrane intracellular membrane-bounded organelle mitochondrial inner membrane intracellular organelle organelle envelope cellular anatomical structure organelle mitochondrial envelope cytoplasm organelle membrane protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex cell periphery plasma membrane nucleus nuclear body nucleoplasm nuclear lumen
CA [auth c]	MRPL39	binding nucleoside phosphate binding nucleotide binding heterocyclic compound binding small molecule binding	-	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex ribonucleoprotein complex membraneless organelle intracellular membraneless organelle ribosome
X [auth V]	MRPL21	RNA binding binding nucleic acid binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex cellular anatomical structure intracellular anatomical structure cytoplasm intracellular organelle organelle membraneless organelle intracellular membraneless organelle ribosome
U [auth S]	MRPL18	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport establishment of localization rRNA transport transmembrane transport localization RNA import into mitochondrion establishment of RNA localization macromolecule localization cellular process RNA localization rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport establishment of localization rRNA transport transmembrane transport localization RNA import into mitochondrion establishment of RNA localization macromolecule localization cellular process RNA localization nucleobase-containing compound transport biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
B [auth 1]	MRPL28	RNA binding binding rRNA binding 5S rRNA binding nucleic acid binding structural molecule activity structural constituent of ribosome	rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport establishment of localization rRNA transport transmembrane transport localization RNA import into mitochondrion establishment of RNA localization macromolecule localization cellular process RNA localization rRNA import into mitochondrion RNA transport nitrogen compound transport transport nucleic acid transport establishment of localization rRNA transport transmembrane transport localization RNA import into mitochondrion establishment of RNA localization macromolecule localization cellular process RNA localization nucleobase-containing compound transport biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle mitochondrial membrane organelle inner membrane membrane mitochondrial inner membrane organelle envelope mitochondrial envelope organelle membrane protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex
O [auth I]	MRPL9	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle protein-containing complex mitochondrial large ribosomal subunit membrane-enclosed lumen mitochondrial matrix intracellular organelle lumen ribosomal subunit organellar ribosome membraneless organelle ribosome large ribosomal subunit organellar large ribosomal subunit mitochondrial protein-containing complex mitochondrial ribosome intracellular membraneless organelle organelle lumen ribonucleoprotein complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 0]	IPR001684	Large ribosomal subunit protein bL27	Family
C [auth 2]	IPR038340	MRP-L47 superfamily, mitochondrial	Homologous Superfamily
C [auth 2]	IPR010729	Large ribosomal subunit protein uL29m, mitochondrial	Family
D [auth 3]	IPR036919	Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily	Homologous Superfamily
D [auth 3]	IPR005996	Large ribosomal subunit protein uL30, bacteria	Family
D [auth 3]	IPR016082	Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain	Domain
E [auth 5]	IPR002677	Large ribosomal subunit protein bL32	Family
E [auth 5]	IPR051991	Mitochondrial ribosomal protein bL32	Family
E [auth 5]	IPR011332	Zinc-binding ribosomal protein	Homologous Superfamily
G [auth 7]	IPR000271	Large ribosomal subunit protein bL34	Family
H [auth 8]	IPR019338	Large ribosomal subunit protein bL35m	Family
L [auth D]	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily
L [auth D]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
L [auth D]	IPR022666	Large ribosomal subunit protein uL2, RNA-binding domain	Domain
L [auth D]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
L [auth D]	IPR002171	Large ribosomal subunit protein uL2	Family
Q [auth O]	IPR036853	Large ribosomal subunit protein uL14 superfamily	Homologous Superfamily
Q [auth O]	IPR000218	Large ribosomal subunit protein uL14	Family
S [auth Q]	IPR000114	Large ribosomal subunit protein uL16, bacteria	Family
S [auth Q]	IPR036920	Large ribosomal subunit protein uL16 superfamily	Homologous Superfamily
S [auth Q]	IPR016180	Large ribosomal subunit protein uL16 domain	Domain
S [auth Q]	IPR047873	Large ribosomal subunit protein uL16	Family
T [auth R]	IPR036373	Large ribosomal subunit protein bL17 superfamily	Homologous Superfamily
T [auth R]	IPR000456	Large ribosomal subunit protein bL17	Family
V [auth T]	IPR001857	Large ribosomal subunit protein bL19	Family
V [auth T]	IPR038657	Large ribosomal subunit protein bL19 superfamily	Homologous Superfamily
V [auth T]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
Y [auth W]	IPR036394	Ribosomal protein uL22 superfamily	Homologous Superfamily
Y [auth W]	IPR001063	Large ribosomal subunit protein uL22	Family
Y [auth W]	IPR047867	Large ribosomal subunit protein uL22, bacteria/organella	Family
Z [auth X]	IPR012678	Ribosomal protein uL23/eL15/eS24 core domain superfamily	Homologous Superfamily
Z [auth X]	IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	Homologous Superfamily
Z [auth X]	IPR013025	Large ribosomal subunit protein uL23-like	Family
AA [auth Y]	IPR057264	Large ribosomal subunit protein uL24, C-terminal domain	Domain
AA [auth Y]	IPR014722	Large ribosomal subunit protein uL2, domain 2	Homologous Superfamily
AA [auth Y]	IPR008991	Translation protein SH3-like domain superfamily	Homologous Superfamily
AA [auth Y]	IPR003256	Large ribosomal subunit protein uL24	Family
AA [auth Y]	IPR041988	Large ribosomal subunit protein uL24, KOW domain	Domain
AA [auth Y]	IPR005824	KOW	Domain
AA [auth Y]	IPR005825	Large ribosomal subunit protein uL24, conserved site	Conserved Site
BA [auth b]	IPR036610	PEBP-like superfamily	Homologous Superfamily
BA [auth b]	IPR008914	Phosphatidylethanolamine-binding protein	Family
BA [auth b]	IPR035810	Phosphatidylethanolamine-binding protein, eukaryotic	Family
EA [auth i]	IPR032710	NTF2-like domain superfamily	Homologous Superfamily
EA [auth i]	IPR007379	Tim44-like domain	Domain
EA [auth i]	IPR051975	Mitochondrial Large Ribosomal Subunit mL45	Family
FA [auth l]	IPR005484	Large ribosomal subunit protein uL18, bacterial/plantae/animalia	Family
FA [auth l]	IPR057268	Large ribosomal subunit protein uL18	Family
FA [auth l]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
HA [auth u]	IPR000352	Peptide chain release factor class I	Domain
HA [auth u]	IPR052104	Mitochondrial Release Factor mL62	Family
DA [auth h]	IPR036389	Ribonuclease III, endonuclease domain superfamily	Homologous Superfamily
DA [auth h]	IPR044444	Large ribosomal subunit protein mL44, dsRNA binding domain, metazoa	Domain
DA [auth h]	IPR055189	Large ribosomal subunit protein mL44, endonuclease domain	Domain
DA [auth h]	IPR014720	Double-stranded RNA-binding domain	Domain
CA [auth c]	IPR012676	TGS-like	Homologous Superfamily
CA [auth c]	IPR018163	Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily	Homologous Superfamily
CA [auth c]	IPR050062	Proline-tRNA synthetase	Family
CA [auth c]	IPR004095	TGS	Domain
CA [auth c]	IPR012675	Beta-grasp domain superfamily	Homologous Superfamily
X [auth V]	IPR028909	Large ribosomal subunit protein bL21-like	Family
X [auth V]	IPR001787	Large ribosomal subunit protein bL21	Family
X [auth V]	IPR036164	Large ribosomal subunit protein bL21-like superfamily	Homologous Superfamily
U [auth S]	IPR005484	Large ribosomal subunit protein uL18, bacterial/plantae/animalia	Family
U [auth S]	IPR057268	Large ribosomal subunit protein uL18	Family
U [auth S]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
B [auth 1]	IPR005484	Large ribosomal subunit protein uL18, bacterial/plantae/animalia	Family
B [auth 1]	IPR057268	Large ribosomal subunit protein uL18	Family
B [auth 1]	IPR036967	Small ribosomal subunit protein uS11 superfamily	Homologous Superfamily
O [auth I]	IPR009027	Large ribosomal subunit protein bL9/RNase H1, N-terminal	Homologous Superfamily
O [auth I]	IPR036935	Large ribosomal subunit protein bL9, N-terminal domain superfamily	Homologous Superfamily
O [auth I]	IPR020070	Large ribosomal subunit protein bL9, N-terminal	Domain
O [auth I]	IPR054302	Large ribosomal subunit protein bL9m, C-terminal domain	Domain
O [auth I]	IPR056864	Large ribosomal subunit protein bL9m, N-terminal domain	Domain
O [auth I]	IPR000244	Large ribosomal subunit protein bL9	Family