4C97 | pdb_00004c97

Cas6 (TTHA0078) H37A mutant

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	CRISPR-associated proteins	8052194	3001554	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	CRISPR-associated proteins	8052195	3001554	SCOP2B (2022-06-29)
A	SCOP2 Family	CRISPR_Cas6-like	8051423	4007361	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	CRISPR-associated proteins	8052195	3001554	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	CRISPR-associated proteins	8052194	3001554	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	POTRA	e4c97B1	A: a/b three-layered sandwiches	X: CCHHC domain	H: CCHHC domain	T: CCHHC domain	F: POTRA	ECOD (v294.1)
B	ALO	e4c97B2	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: ALO	ECOD (v294.1)
A	ALO	e4c97A2	A: a/b three-layered sandwiches	X: DEATH domain	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: ALO	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.70.1890	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
B	3.30.70.1900	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
A	3.30.70.1890	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)
A	3.30.70.1900	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF10040	CRISPR-associated endoribonuclease Cas6 (CRISPR_Cas6)	CRISPR-associated endoribonuclease Cas6	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	CAS6A	endonuclease activity nuclease activity catalytic activity, acting on a nucleic acid catalytic activity hydrolase activity, acting on ester bonds hydrolase activity	biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR045747	CRISPR-associated protein Cas6, N-terminal domain superfamily	Homologous Superfamily
A, B	IPR019267	CRISPR-associated protein Cas6, C-terminal	Domain
A, B	IPR010156	CRISPR-associated endoribonuclease Cas6	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.