The structure of the COPII coat assembled on membranes
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| J [auth M] | SCOP2B Superfamily | Helical domain of Sec23/24 | 8038525 | 3001173 | SCOP2B (2022-06-29) |
| J [auth M] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8038531 | 3001553 | SCOP2B (2022-06-29) |
| J [auth M] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8038531 | 3001553 | SCOP2B (2022-06-29) |
| J [auth M] | SCOP2B Superfamily | Zn-finger domain of Sec23/24 | 8038541 | 3000837 | SCOP2B (2022-06-29) |
| J [auth M] | SCOP2B Superfamily | vWA-like | 8038533 | 3000832 | SCOP2B (2022-06-29) |
| I [auth L] | SCOP2B Superfamily | Helical domain of Sec23/24 | 8038525 | 3001173 | SCOP2B (2022-06-29) |
| I [auth L] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8038531 | 3001553 | SCOP2B (2022-06-29) |
| I [auth L] | SCOP2B Superfamily | vWA-like | 8038533 | 3000832 | SCOP2B (2022-06-29) |
| I [auth L] | SCOP2B Superfamily | Zn-finger domain of Sec23/24 | 8038541 | 3000837 | SCOP2B (2022-06-29) |
| I [auth L] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8038531 | 3001553 | SCOP2B (2022-06-29) |
| D [auth E] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8038531 | 3001553 | SCOP2B (2022-06-29) |
| D [auth E] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8038531 | 3001553 | SCOP2B (2022-06-29) |
| D [auth E] | SCOP2B Superfamily | Zn-finger domain of Sec23/24 | 8038541 | 3000837 | SCOP2B (2022-06-29) |
| D [auth E] | SCOP2B Superfamily | vWA-like | 8038533 | 3000832 | SCOP2B (2022-06-29) |
| D [auth E] | SCOP2B Superfamily | Helical domain of Sec23/24 | 8038525 | 3001173 | SCOP2B (2022-06-29) |
| H [auth K] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8060249 | 3002022 | SCOP2B (2022-06-29) |
| G [auth J] | SCOP2B Superfamily | Ras-like P-loop GTPases | 8060249 | 3002022 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Ras-like P-loop GTPases | 8060249 | 3002022 | SCOP2B (2022-06-29) |
| F [auth G] | SCOP2B Superfamily | Helical domain of Sec23/24 | 8036407 | 3001173 | SCOP2B (2022-06-29) |
| F [auth G] | SCOP2B Superfamily | vWA-like | 8036410 | 3000832 | SCOP2B (2022-06-29) |
| F [auth G] | SCOP2B Superfamily | Zn-finger domain of Sec23/24 | 8036412 | 3000837 | SCOP2B (2022-06-29) |
| F [auth G] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8036409 | 3001553 | SCOP2B (2022-06-29) |
| F [auth G] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8036409 | 3001553 | SCOP2B (2022-06-29) |
| F [auth G] | SCOP2B Superfamily | C-terminal, gelsolin-like domain of Sec23/24 | 8036411 | 3000569 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | C-terminal, gelsolin-like domain of Sec23/24 | 8036411 | 3000569 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | Helical domain of Sec23/24 | 8036407 | 3001173 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8036409 | 3001553 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8036409 | 3001553 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | vWA-like | 8036410 | 3000832 | SCOP2B (2022-06-29) |
| C [auth D] | SCOP2B Superfamily | Zn-finger domain of Sec23/24 | 8036412 | 3000837 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Helical domain of Sec23/24 | 8036407 | 3001173 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | vWA-like | 8036410 | 3000832 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Zn-finger domain of Sec23/24 | 8036412 | 3000837 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8036409 | 3001553 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | beta-sandwich domain of sec23/24 | 8036409 | 3001553 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | C-terminal, gelsolin-like domain of Sec23/24 | 8036411 | 3000569 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| E [auth F] | Hemagglutinin | e4bziF02 | A: a/b three-layered sandwiches | X: Rossmann-like | H: P-loop domains-related | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: Hemagglutinin | ECOD (v294.1) |
| J [auth M] | Peptidase_M49 | e4bziM15 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: Peptidase_M49 | ECOD (v294.1) |
| I [auth L] | Peptidase_M49 | e4bziL15 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: Peptidase_M49 | ECOD (v294.1) |
| D [auth E] | Peptidase_M49 | e4bziE15 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: Peptidase_M49 | ECOD (v294.1) |
| H [auth K] | CBM_48 | e4bziK1 | A: a/b three-layered sandwiches | X: HAMP domain | H: HAMP domain | T: HAMP domain | F: CBM_48 | ECOD (v294.1) |
| G [auth J] | CBM_48 | e4bziJ1 | A: a/b three-layered sandwiches | X: HAMP domain | H: HAMP domain | T: HAMP domain | F: CBM_48 | ECOD (v294.1) |
| B | CBM_48 | e4bziB1 | A: a/b three-layered sandwiches | X: HAMP domain | H: HAMP domain | T: HAMP domain | F: CBM_48 | ECOD (v294.1) |
| F [auth G] | e4bziG1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: | ECOD (v294.1) | |
| C [auth D] | e4bziD1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: | ECOD (v294.1) | |
| A | e4bziA1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| D [auth E], I [auth L], J [auth M] | PF04815 | Sec23/Sec24 helical domain (Sec23_helical) | Sec23/Sec24 helical domain | COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ... | Domain |
| D [auth E], I [auth L], J [auth M] | PF00626 | Gelsolin repeat (Gelsolin) | Gelsolin repeat | Domain | |
| D [auth E], I [auth L], J [auth M] | PF08033 | Sec23/Sec24 beta-sandwich domain (Sec23_BS) | Sec23/Sec24 beta-sandwich domain | Domain | |
| D [auth E], I [auth L], J [auth M] | PF04811 | Sec23/Sec24 trunk domain (Sec23_trunk) | Sec23/Sec24 trunk domain | COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ... | Domain |
| D [auth E], I [auth L], J [auth M] | PF04810 | Sec23/Sec24 zinc finger (zf-Sec23_Sec24) | Sec23/Sec24 zinc finger | COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ... | Domain |
| A, C [auth D], F [auth G] | PF04815 | Sec23/Sec24 helical domain (Sec23_helical) | Sec23/Sec24 helical domain | COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ... | Domain |
| A, C [auth D], F [auth G] | PF00626 | Gelsolin repeat (Gelsolin) | Gelsolin repeat | Domain | |
| A, C [auth D], F [auth G] | PF08033 | Sec23/Sec24 beta-sandwich domain (Sec23_BS) | Sec23/Sec24 beta-sandwich domain | Domain | |
| A, C [auth D], F [auth G] | PF04811 | Sec23/Sec24 trunk domain (Sec23_trunk) | Sec23/Sec24 trunk domain | COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ... | Domain |
| A, C [auth D], F [auth G] | PF04810 | Sec23/Sec24 zinc finger (zf-Sec23_Sec24) | Sec23/Sec24 zinc finger | COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ... | Domain |














