Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth G]SCOP2B SuperfamilyHelical domain of Sec23/248036407 3001173 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyvWA-like8036410 3000832 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyZn-finger domain of Sec23/248036412 3000837 SCOP2B (2022-06-29)
F [auth G]SCOP2B Superfamilybeta-sandwich domain of sec23/248036409 3001553 SCOP2B (2022-06-29)
F [auth G]SCOP2B Superfamilybeta-sandwich domain of sec23/248036409 3001553 SCOP2B (2022-06-29)
F [auth G]SCOP2B SuperfamilyC-terminal gelsolin-like domain of Sec23/248036411 3000569 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyHelical domain of Sec23/248036407 3001173 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyvWA-like8036410 3000832 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyZn-finger domain of Sec23/248036412 3000837 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyC-terminal gelsolin-like domain of Sec23/248036411 3000569 SCOP2B (2022-06-29)
ASCOP2B Superfamilybeta-sandwich domain of sec23/248036409 3001553 SCOP2B (2022-06-29)
ASCOP2B Superfamilybeta-sandwich domain of sec23/248036409 3001553 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyC-terminal gelsolin-like domain of Sec23/248036411 3000569 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyHelical domain of Sec23/248036407 3001173 SCOP2B (2022-06-29)
C [auth D]SCOP2B Superfamilybeta-sandwich domain of sec23/248036409 3001553 SCOP2B (2022-06-29)
C [auth D]SCOP2B Superfamilybeta-sandwich domain of sec23/248036409 3001553 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyvWA-like8036410 3000832 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyZn-finger domain of Sec23/248036412 3000837 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRas-like P-loop GTPases8060249 3002022 SCOP2B (2022-06-29)
G [auth J]SCOP2B SuperfamilyRas-like P-loop GTPases8060249 3002022 SCOP2B (2022-06-29)
H [auth K]SCOP2B SuperfamilyRas-like P-loop GTPases8060249 3002022 SCOP2B (2022-06-29)
D [auth E]SCOP2B Superfamilybeta-sandwich domain of sec23/248038531 3001553 SCOP2B (2022-06-29)
D [auth E]SCOP2B Superfamilybeta-sandwich domain of sec23/248038531 3001553 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyZn-finger domain of Sec23/248038541 3000837 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyvWA-like8038533 3000832 SCOP2B (2022-06-29)
D [auth E]SCOP2B SuperfamilyHelical domain of Sec23/248038525 3001173 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyHelical domain of Sec23/248038525 3001173 SCOP2B (2022-06-29)
I [auth L]SCOP2B Superfamilybeta-sandwich domain of sec23/248038531 3001553 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyvWA-like8038533 3000832 SCOP2B (2022-06-29)
I [auth L]SCOP2B SuperfamilyZn-finger domain of Sec23/248038541 3000837 SCOP2B (2022-06-29)
I [auth L]SCOP2B Superfamilybeta-sandwich domain of sec23/248038531 3001553 SCOP2B (2022-06-29)
J [auth M]SCOP2B SuperfamilyHelical domain of Sec23/248038525 3001173 SCOP2B (2022-06-29)
J [auth M]SCOP2B Superfamilybeta-sandwich domain of sec23/248038531 3001553 SCOP2B (2022-06-29)
J [auth M]SCOP2B Superfamilybeta-sandwich domain of sec23/248038531 3001553 SCOP2B (2022-06-29)
J [auth M]SCOP2B SuperfamilyZn-finger domain of Sec23/248038541 3000837 SCOP2B (2022-06-29)
J [auth M]SCOP2B SuperfamilyvWA-like8038533 3000832 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
F [auth G]PF08033e4bziG1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF08033ECOD (1.6)
F [auth G]PF04815e4bziG5 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: PF04815ECOD (1.6)
F [auth G]PF00626e4bziG3 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: PF00626ECOD (1.6)
F [auth G]PF04811e4bziG4 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: PF04811ECOD (1.6)
F [auth G]PF04810e4bziG2 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF04810ECOD (1.6)
APF08033e4bziA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF08033ECOD (1.6)
APF04815e4bziA5 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: PF04815ECOD (1.6)
APF00626e4bziA4 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: PF00626ECOD (1.6)
APF04811e4bziA1 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: PF04811ECOD (1.6)
APF04810e4bziA3 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF04810ECOD (1.6)
C [auth D]PF08033e4bziD1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF08033ECOD (1.6)
C [auth D]PF04815e4bziD4 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: PF04815ECOD (1.6)
C [auth D]PF00626e4bziD2 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: PF00626ECOD (1.6)
C [auth D]PF04811e4bziD3 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: PF04811ECOD (1.6)
C [auth D]PF04810e4bziD5 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF04810ECOD (1.6)
BPF00025e4bziB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00025ECOD (1.6)
G [auth J]PF00025e4bziJ1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00025ECOD (1.6)
H [auth K]PF00025e4bziK1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00025ECOD (1.6)
D [auth E]PF08033e4bziE16 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF08033ECOD (1.6)
D [auth E]PF04815e4bziE15 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: PF04815ECOD (1.6)
D [auth E]PF00626e4bziE19 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: PF00626ECOD (1.6)
D [auth E]PF04811e4bziE18 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: PF04811ECOD (1.6)
D [auth E]PF04810e4bziE17 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF04810ECOD (1.6)
I [auth L]PF08033e4bziL16 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF08033ECOD (1.6)
I [auth L]PF04815e4bziL15 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: PF04815ECOD (1.6)
I [auth L]PF00626e4bziL19 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: PF00626ECOD (1.6)
I [auth L]PF04811e4bziL18 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: PF04811ECOD (1.6)
I [auth L]PF04810e4bziL17 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF04810ECOD (1.6)
J [auth M]PF08033e4bziM16 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Common fold of diphtheria toxin/transcription factors/cytochrome fF: PF08033ECOD (1.6)
J [auth M]PF04815e4bziM15 A: alpha arraysX: ERP29 C domain-likeH: Helical domain of Sec23/24 (From Topology)T: Helical domain of Sec23/24F: PF04815ECOD (1.6)
J [auth M]PF00626e4bziM19 A: a+b three layersX: Gelsolin-like (From Topology)H: Gelsolin-like (From Topology)T: Gelsolin-likeF: PF00626ECOD (1.6)
J [auth M]PF04811e4bziM18 A: a/b three-layered sandwichesX: HAD domain-likeH: HAD domain-relatedT: vWA-likeF: PF04811ECOD (1.6)
J [auth M]PF04810e4bziM17 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF04810ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
C [auth D],
F [auth G]
PF04815Sec23/Sec24 helical domain (Sec23_helical)Sec23/Sec24 helical domainCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is composed of five alpha helices.
Domain
A,
C [auth D],
F [auth G]
PF00626Gelsolin repeat (Gelsolin)Gelsolin repeat- Domain
A,
C [auth D],
F [auth G]
PF08033Sec23/Sec24 beta-sandwich domain (Sec23_BS)Sec23/Sec24 beta-sandwich domain- Domain
A,
C [auth D],
F [auth G]
PF04811Sec23/Sec24 trunk domain (Sec23_trunk)Sec23/Sec24 trunk domainCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is known as the trunk domain and has an alpha/beta vWA fold and forms the dimer interface.
Domain
A,
C [auth D],
F [auth G]
PF04810Sec23/Sec24 zinc finger (zf-Sec23_Sec24)Sec23/Sec24 zinc fingerCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is found to be zinc binding domain.
Domain
B,
G [auth J],
H [auth K]
PF00025ADP-ribosylation factor family (Arf)ADP-ribosylation factor familyPfam combines a number of different Prosite families togetherDomain
D [auth E],
I [auth L],
J [auth M]
PF04815Sec23/Sec24 helical domain (Sec23_helical)Sec23/Sec24 helical domainCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is composed of five alpha helices.
Domain
D [auth E],
I [auth L],
J [auth M]
PF00626Gelsolin repeat (Gelsolin)Gelsolin repeat- Domain
D [auth E],
I [auth L],
J [auth M]
PF08033Sec23/Sec24 beta-sandwich domain (Sec23_BS)Sec23/Sec24 beta-sandwich domain- Domain
D [auth E],
I [auth L],
J [auth M]
PF04811Sec23/Sec24 trunk domain (Sec23_trunk)Sec23/Sec24 trunk domainCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is known as the trunk domain and has an alpha/beta vWA fold and forms the dimer interface.
Domain
D [auth E],
I [auth L],
J [auth M]
PF04810Sec23/Sec24 zinc finger (zf-Sec23_Sec24)Sec23/Sec24 zinc fingerCOPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and ...COPII-coated vesicles carry proteins from the endoplasmic reticulum to the Golgi complex. This vesicular transport can be reconstituted by using three cytosolic components containing five proteins: the small GTPase Sar1p, the Sec23p/24p complex, and the Sec13p/Sec31p complex. This domain is found to be zinc binding domain.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
C [auth D],
F [auth G]
SEC23P
B,
G [auth J],
H [auth K]
SAR1P
D [auth E],
I [auth L],
J [auth M]
SEC24P
E [auth F],
K [auth N],
L [auth O]
SEC24P

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
C [auth D],
F [auth G]
IPR029006ADF-H/Gelsolin-like domain superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR006896Sec23/Sec24, trunk domainDomain
A,
C [auth D],
F [auth G]
IPR036180Gelsolin-like domain superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR006900Sec23/Sec24, helical domainDomain
A,
C [auth D],
F [auth G]
IPR006895Zinc finger, Sec23/Sec24-typeDomain
A,
C [auth D],
F [auth G]
IPR007123Gelsolin-like domainDomain
A,
C [auth D],
F [auth G]
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR037550Sec23, C-terminalDomain
A,
C [auth D],
F [auth G]
IPR037364Protein transport protein Sec23Family
A,
C [auth D],
F [auth G]
IPR036175Sec23/Sec24 helical domain superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR036174Zinc finger, Sec23/Sec24-type superfamilyHomologous Superfamily
A,
C [auth D],
F [auth G]
IPR012990Sec23/Sec24 beta-sandwichDomain
B,
G [auth J],
H [auth K]
IPR006687Small GTPase superfamily, SAR1-typeFamily
B,
G [auth J],
H [auth K]
IPR005225Small GTP-binding protein domainDomain
B,
G [auth J],
H [auth K]
IPR006689Small GTPase superfamily, ARF/SAR typeFamily
B,
G [auth J],
H [auth K]
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR029006ADF-H/Gelsolin-like domain superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR006896Sec23/Sec24, trunk domainDomain
D [auth E],
I [auth L],
J [auth M]
IPR036180Gelsolin-like domain superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR006900Sec23/Sec24, helical domainDomain
D [auth E],
I [auth L],
J [auth M]
IPR041742Sec24-like, trunk domainDomain
D [auth E],
I [auth L],
J [auth M]
IPR006895Zinc finger, Sec23/Sec24-typeDomain
D [auth E],
I [auth L],
J [auth M]
IPR007123Gelsolin-like domainDomain
D [auth E],
I [auth L],
J [auth M]
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR036175Sec23/Sec24 helical domain superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR036174Zinc finger, Sec23/Sec24-type superfamilyHomologous Superfamily
D [auth E],
I [auth L],
J [auth M]
IPR012990Sec23/Sec24 beta-sandwichDomain
E [auth F],
K [auth N],
L [auth O]
IPR029006ADF-H/Gelsolin-like domain superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR006896Sec23/Sec24, trunk domainDomain
E [auth F],
K [auth N],
L [auth O]
IPR036180Gelsolin-like domain superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR006900Sec23/Sec24, helical domainDomain
E [auth F],
K [auth N],
L [auth O]
IPR041742Sec24-like, trunk domainDomain
E [auth F],
K [auth N],
L [auth O]
IPR006895Zinc finger, Sec23/Sec24-typeDomain
E [auth F],
K [auth N],
L [auth O]
IPR007123Gelsolin-like domainDomain
E [auth F],
K [auth N],
L [auth O]
IPR036465von Willebrand factor A-like domain superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR036175Sec23/Sec24 helical domain superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR036174Zinc finger, Sec23/Sec24-type superfamilyHomologous Superfamily
E [auth F],
K [auth N],
L [auth O]
IPR012990Sec23/Sec24 beta-sandwichDomain