4BML | pdb_00004bml

C-alpha backbone trace of major capsid protein gp39 found in marine virus Syn5.


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
GCyclin_Ne4bmlG1 A: alpha bundlesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (develop294)
FCyclin_Ne4bmlF1 A: alpha bundlesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (develop294)
EHemagglutinine4bmlE1 A: alpha bundlesX: Outer membrane meander beta-barrelsH: PorinsT: PorinF: HemagglutininECOD (develop294)
DCyclin_Ne4bmlD1 A: alpha bundlesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (develop294)
CCyclin_Ne4bmlC1 A: alpha bundlesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (develop294)
BCyclin_Ne4bmlB1 A: alpha bundlesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (develop294)
ACyclin_Ne4bmlA1 A: alpha bundlesX: HTHH: Toll/Interleukin receptor TIR domainT: Toll/Interleukin receptor TIR domainF: Cyclin_NECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF21703Major capsid protein (Gp10A-like)Major capsid proteinThis protein family includes Major capsid protein from Bacteriophage T7 (Gp10A) and similar proteins from tailed bacteriophages and bacterial prophages. Gp10A subunits adopt an HK97-like conformation to form the viral shell [2]. Domain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR049301Capsid Gp10A/Gp10B-like domainDomain