crystal structure of the human EphA4 ectodomain in complex with human ephrin A5
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | BON | e4bkaA1 | A: alpha bundles | X: amino-terminal domain of OmpATb | H: amino-terminal domain of OmpATb | T: amino-terminal domain of OmpATb | F: BON | ECOD (develop294) |
| A | Myb_DNA-binding | e4bkaA4 | A: alpha bundles | X: Immunoglobulin-like beta-sandwich | H: Osmotin-like | T: Osmotin-like | F: Myb_DNA-binding | ECOD (develop294) |
| B [auth C] | PEPCK_N | e4bkaC1 | A: alpha bundles | X: PBZ domain | H: PBZ domain | T: PBZ domain | F: PEPCK_N | ECOD (develop294) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01404 | Ephrin receptor ligand binding domain (Ephrin_lbd) | Ephrin receptor ligand binding domain | The Eph receptors, which bind to ephrins Pfam:PF00812 are a large family of receptor tyrosine kinases. This family represents the amino terminal domain which binds the ephrin ligand [1]. | Domain | |
| PF25599 | Ephrin cysteine rich domain (Ephrin_CRD) | Ephrin cysteine rich domain | This entry represents the cysteine-rich domain found in ephrin proteins. Ephrins are important cell surface proteins that act as ligands for Eph receptor tyrosine kinases | Domain | |
| PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | Domain | ||














