4BH5 | pdb_00004bh5

LytM domain of EnvC, an activator of cell wall amidases in Escherichia coli

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	PEPCK_N	e4bh5D1	A: alpha bundles	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: PEPCK_N	ECOD (develop294)
C	PEPCK_N	e4bh5C1	A: alpha bundles	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: PEPCK_N	ECOD (develop294)
B	PEPCK_N	e4bh5B1	A: alpha bundles	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: PEPCK_N	ECOD (develop294)
A	PEPCK_N	e4bh5A1	A: alpha bundles	X: PBZ domain	H: PBZ domain	T: PBZ domain	F: PEPCK_N	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.70.70.10	Mainly Beta	Distorted Sandwich	Glucose Permease (Domain IIA)	Glucose Permease (Domain IIA)	CATH (4.3.0)
C	2.70.70.10	Mainly Beta	Distorted Sandwich	Glucose Permease (Domain IIA)	Glucose Permease (Domain IIA)	CATH (4.3.0)
B	2.70.70.10	Mainly Beta	Distorted Sandwich	Glucose Permease (Domain IIA)	Glucose Permease (Domain IIA)	CATH (4.3.0)
A	2.70.70.10	Mainly Beta	Distorted Sandwich	Glucose Permease (Domain IIA)	Glucose Permease (Domain IIA)	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF01551	Peptidase family M23 (Peptidase_M23)	Peptidase family M23	Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacte ...	Members of this family are zinc metallopeptidases with a range of specificities. The peptidase family M23 is included in this family, these are Gly-Gly endopeptidases. Peptidase family M23 are also endopeptidases. This family also includes some bacterial lipoproteins such as Swiss:P33648 for which no proteolytic activity has been demonstrated. This family also includes leukocyte cell-derived chemotaxin 2 (LECT2) proteins. LECT2 is a liver-specific protein which is thought to be linked to hepatocyte growth although the exact function of this protein is unknown.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	MUREIN HYDROLASE ACTIVATOR ENVC	peptidase activity catalytic activity, acting on a protein metalloendopeptidase activity hydrolase activity metallopeptidase activity catalytic activity endopeptidase activity	response to stimulus response to chemical response to xenobiotic stimulus cellular component biogenesis peptidoglycan-based cell wall biogenesis cell wall biogenesis cell wall organization or biogenesis cellular process cellular component organization or biogenesis septum digestion after cytokinesis cell division response to radiation response to abiotic stimulus	cell division site cellular anatomical structure cell periphery plasma membrane membrane periplasmic space outer membrane-bounded periplasmic space cell envelope

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR011055	Duplicated hybrid motif	Homologous Superfamily
A, B, C, D	IPR050570	Bacterial cell wall metabolism enzyme	Family
A, B, C, D	IPR016047	M23ase, beta-sheet core domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.