Ad5 knob in complex with a designed ankyrin repeat protein
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | Virus attachment protein globular domain | 8041205 | 3001376 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Virus attachment protein globular domain | 8041205 | 3001376 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Virus attachment protein globular domain | 8041205 | 3001376 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Pneumovirus_M2 | e4atzC2 | A: alpha bundles | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: Pneumovirus_M2 | ECOD (develop294) |
| B | Ribosomal_L1 | e4atzB2 | A: alpha bundles | X: Glutamine synthetase-like | H: Glutamine synthetase/guanido kinase | T: Glutamine synthetase/guanido kinase | F: Ribosomal_L1 | ECOD (develop294) |
| A | C1-set | e4atzA1 | A: alpha bundles | X: Ribonuclease H-like | H: Ribonuclease H-like | T: Ribonuclease H-like | F: C1-set | ECOD (develop294) |
| F | Ephrin_lbd | e4atzF2 | A: alpha bundles | X: Subtilisin-like | H: Subtilisin-like | T: Subtilisin-like | F: Ephrin_lbd | ECOD (develop294) |
| E | Rrf2 | e4atzE1 | A: alpha bundles | X: beta-Grasp | H: HTH | T: winged helix domain | F: Rrf2 | ECOD (develop294) |
| D | C1-set | e4atzD1 | A: alpha bundles | X: Ribonuclease H-like | H: Ribonuclease H-like | T: Ribonuclease H-like | F: C1-set | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
| B | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
| A | 2.60.90.10 | Mainly Beta | Sandwich | Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) | Adenovirus pIV-related, attachment domain | CATH (4.3.0) |
| F | 1.25.40.20 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Ankyrin repeat-containing domain | CATH (4.3.0) |
| E | 1.25.40.20 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Ankyrin repeat-containing domain | CATH (4.3.0) |
| D | 1.25.40.20 | Mainly Alpha | Alpha Horseshoe | Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat | Ankyrin repeat-containing domain | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009013 | Attachment protein shaft domain superfamily | Homologous Superfamily | |
| IPR000978 | Adenoviral fibre protein, knob | Domain | |
| IPR008982 | Adenovirus pIV-like, attachment domain | Homologous Superfamily | |
| IPR000931 | Adenovirus fibre protein | Family | |
| IPR000939 | Adenoviral fibre protein, repeat/shaft region | Repeat |














