3ZVJ | pdb_00003zvj

Crystal structure of high molecular weight (HMW) form of Peroxiredoxin I from Schistosoma mansoni

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d3zvjd_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
T	d3zvjt1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
T	d3zvjt2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
S	d3zvjs1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
S	d3zvjs2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
R	d3zvjr1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
R	d3zvjr2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
Q	d3zvjq_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
P	d3zvjp1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
P	d3zvjp2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
O	d3zvjo1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
O	d3zvjo2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
N	d3zvjn_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
M	d3zvjm1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
M	d3zvjm2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
L	d3zvjl1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
L	d3zvjl2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
K	d3zvjk1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
K	d3zvjk2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
J	d3zvjj_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
I	d3zvji_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
H	d3zvjh_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
G	d3zvjg_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
F	d3zvjf1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
F	d3zvjf2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
E	d3zvje_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
C	d3zvjc1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
C	d3zvjc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
B	d3zvjb1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
B	d3zvjb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)
A	d3zvja_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	(Schistosoma mansoni ) [TaxId: 6183 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	Thioredoxin	e3zvjD2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
T	Thioredoxin	e3zvjT2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
S	Thioredoxin	e3zvjS2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
R	Thioredoxin	e3zvjR2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
Q	Thioredoxin	e3zvjQ2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
P	Thioredoxin	e3zvjP2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
O	Thioredoxin	e3zvjO2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
N	Thioredoxin	e3zvjN2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
M	Thioredoxin	e3zvjM2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
L	Thioredoxin	e3zvjL2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
K	Thioredoxin	e3zvjK2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
J	Thioredoxin	e3zvjJ2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
I	Thioredoxin	e3zvjI2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
H	Thioredoxin	e3zvjH2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
G	Thioredoxin	e3zvjG2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
F	Thioredoxin	e3zvjF2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
E	Thioredoxin	e3zvjE2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
C	Thioredoxin	e3zvjC2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
B	Thioredoxin	e3zvjB2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)
A	Thioredoxin	e3zvjA2	A: a/b three-layered sandwiches	X: Fusion glycoprotein F2	H: RIFT-related	T: double psi	F: Thioredoxin	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
T	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
S	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
R	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
Q	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
P	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
O	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
N	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
M	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
L	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
K	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
J	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
I	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
H	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
G	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
F	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
E	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
C	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
B	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
A	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
D	THIOREDOXIN PEROXIDASE	peroxidase activity oxidoreductase activity thioredoxin-dependent peroxiredoxin activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor thioredoxin peroxidase activity catalytic activity peroxiredoxin activity identical protein binding protein binding binding	cellular response to stimulus cellular response to stress response to stimulus response to stress cellular process catabolic process hydrogen peroxide metabolic process reactive oxygen species metabolic process metabolic process hydrogen peroxide catabolic process cell redox homeostasis cellular homeostasis homeostatic process response to oxidative stress	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
A, B, C, E, F A, B, C, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	THIOREDOXIN PEROXIDASE	peroxidase activity oxidoreductase activity thioredoxin-dependent peroxiredoxin activity antioxidant activity oxidoreductase activity, acting on peroxide as acceptor thioredoxin peroxidase activity catalytic activity peroxiredoxin activity identical protein binding protein binding binding	cellular response to stimulus cellular response to stress response to stimulus response to stress cellular process catabolic process hydrogen peroxide metabolic process reactive oxygen species metabolic process metabolic process hydrogen peroxide catabolic process cell redox homeostasis cellular homeostasis homeostatic process response to oxidative stress	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
D	IPR019479	Peroxiredoxin, C-terminal	Domain
D	IPR024706	Peroxiredoxin, AhpC-type	Family
D	IPR050217	Thiol-specific antioxidant peroxiredoxin	Family
D	IPR013766	Thioredoxin domain	Domain
D	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
D	IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Domain
A, B, C, E, F A, B, C, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR019479	Peroxiredoxin, C-terminal	Domain
A, B, C, E, F A, B, C, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR024706	Peroxiredoxin, AhpC-type	Family
A, B, C, E, F A, B, C, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR050217	Thiol-specific antioxidant peroxiredoxin	Family
A, B, C, E, F A, B, C, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR013766	Thioredoxin domain	Domain
A, B, C, E, F A, B, C, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
A, B, C, E, F A, B, C, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T	IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Domain