Crystal structure of the kleisin-N SMC interface in prokaryotic condensin
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Arena_glycoprot | e3zgxA1 | A: alpha bundles | X: Beta domain of coronavirus spike glycoprotein | H: HAMP domain | T: Polymerase basic protein 2 cap-binding domain | F: Arena_glycoprot | ECOD (develop294) |
| B | Arena_glycoprot | e3zgxB1 | A: alpha bundles | X: Beta domain of coronavirus spike glycoprotein | H: HAMP domain | T: Polymerase basic protein 2 cap-binding domain | F: Arena_glycoprot | ECOD (develop294) |
| C | PF28858 | e3zgxC01 | A: alpha bundles | X: Rossmann-like | H: P-loop domains-related | T: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | F: PF28858 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
| A | 6.10.140.1720 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
| B | 3.40.50.300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | P-loop containing nucleotide triphosphate hydrolases | CATH (4.3.0) |
| B | 6.10.140.1720 | Special | Helix non-globular | Helix Hairpins | CATH (4.3.0) | |
| D [auth Z] | 6.10.250.2410 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) | |
| C | 6.10.250.2410 | Special | Helix non-globular | Single alpha-helices involved in coiled-coils or other helix-helix interfaces | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02463 | RecF/RecN/SMC N terminal domain (SMC_N) | RecF/RecN/SMC N terminal domain | This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. Th ... | Domain | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR010935 | SMCs flexible hinge | Domain | |
| IPR036277 | SMCs flexible hinge superfamily | Homologous Superfamily | |
| IPR003395 | RecF/RecN/SMC, N-terminal | Domain | |
| IPR024704 | Structural maintenance of chromosomes protein | Family | |
| IPR011890 | Structural maintenance of chromosomes protein, prokaryotic | Family | |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
| C, D [auth Z] | IPR003768 | Segregation and condensation protein A | Family |
| C, D [auth Z] | IPR023093 | ScpA-like, C-terminal | Homologous Superfamily |














