3ZBD
Structure of TGEV nsp1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | SARS coronavirus Nsp1-like | 8045991 | 4001732 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | SARS coronavirus Nsp1-like | 8092556 | 3000331 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | SARS coronavirus Nsp1-like | 8092556 | 3000331 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF16688 | e3zbdA1 | A: beta complex topology | X: Coronavirus nsp1 (From Topology) | H: Coronavirus nsp1 (From Topology) | T: Coronavirus nsp1 | F: PF16688 | ECOD (1.6) |
B | PF16688 | e3zbdB1 | A: beta complex topology | X: Coronavirus nsp1 (From Topology) | H: Coronavirus nsp1 (From Topology) | T: Coronavirus nsp1 | F: PF16688 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.30.1000 | Mainly Beta | Roll | SH3 type barrels. | Replicase polyprotein 1a | CATH (4.3.0) |
B | 2.30.30.1000 | Mainly Beta | Roll | SH3 type barrels. | Replicase polyprotein 1a | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF16688 | Replicase polyprotein N-term from Coronavirus nsp1 (CNV-Replicase_N) | Replicase polyprotein N-term from Coronavirus nsp1 | CNV-Replicase_N is the N-terminal domain of a family of ssRNA positive-stranded porcine transmissible gastroenteritis coronaviruses. the domain folds into a six-stranded beta-barrel fold with a long alpha helix on the rim of the barrel. This fold is ... | Domain |