Crystal structure of YidC from Escherichia coli
External Resource: Annotation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2 Family | YidC transmembrane domain-like | 8049833 | 4006662 | SCOP2 (2022-06-29) |
| B | SCOP2 Family | YidC periplasmic domain-like | 8050685 | 4007001 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | YidC transmembrane domain-like | 8101838 | 3002720 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | Galactose mutarotase-like | 8101839 | 3000035 | SCOP2 (2022-06-29) |
| A | SCOP2B Superfamily | Galactose mutarotase-like | 8101839 | 3000035 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | YidC transmembrane domain-like | 8101838 | 3002720 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Peptidase_M99_C | e3wvfB1 | A: alpha bundles | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Peptidase_M99_C | ECOD (develop294) |
| A | C2 | e3wvfA1 | A: alpha bundles | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: C2 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.70.98.90 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.3.0) |
| A | 2.70.98.90 | Mainly Beta | Distorted Sandwich | Beta-galactosidase | Chain A, domain 5 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR047196 | Membrane insertase YidC/ALB, C-terminal | Domain | |
| IPR019998 | Membrane insertase YidC | Family | |
| IPR001708 | Membrane insertase YidC/ALB3/OXA1/COX18 | Family | |
| IPR038221 | YidC, periplasmic domain superfamily | Homologous Superfamily | |
| IPR028053 | Membrane insertase YidC, N-terminal | Domain | |
| IPR028055 | Membrane insertase YidC/Oxa/ALB, C-terminal | Domain |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
| Chains | External Link | Comment |
|---|---|---|
| MemProtMD | Annotated as membrane protein by MemProtMD |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
| Chains | Resource Link | Group | Subgroup | Protein |
|---|---|---|---|---|
| mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Sec, Translocase, and Insertase Proteins | YidC insertase, full length |














