3WI3 | pdb_00003wi3

Crystal Structure of the Sld3/Treslin domain from yeast Sld3

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	SLD3	e3wi3C1	A: alpha superhelices	X: Cdc45-Binding Domain in Sld3/Treslin (From Topology)	H: Cdc45-Binding Domain in Sld3/Treslin (From Topology)	T: Cdc45-Binding Domain in Sld3/Treslin	F: SLD3	ECOD (1.6)
B	SLD3	e3wi3B1	A: alpha superhelices	X: Cdc45-Binding Domain in Sld3/Treslin (From Topology)	H: Cdc45-Binding Domain in Sld3/Treslin (From Topology)	T: Cdc45-Binding Domain in Sld3/Treslin	F: SLD3	ECOD (1.6)
A	SLD3	e3wi3A1	A: alpha superhelices	X: Cdc45-Binding Domain in Sld3/Treslin (From Topology)	H: Cdc45-Binding Domain in Sld3/Treslin (From Topology)	T: Cdc45-Binding Domain in Sld3/Treslin	F: SLD3	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	1.20.58.2130	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
B	1.20.58.2130	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)
A	1.20.58.2130	Mainly Alpha	Up-down Bundle	Methane Monooxygenase Hydroxylase	Chain G, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF08639	DNA replication regulator SLD3, STD domain (Sld3_STD)	DNA replication regulator SLD3, STD domain	The SLD3 DNA replication regulator is required for loading and maintenance of Cdc45 on chromatin during DNA replication [2]. This entry represents the SLD3-Treslin domain (STD), which is shared with treslin, the metazoan counterpart, which differ in ...	The SLD3 DNA replication regulator is required for loading and maintenance of Cdc45 on chromatin during DNA replication [2]. This entry represents the SLD3-Treslin domain (STD), which is shared with treslin, the metazoan counterpart, which differ in size and amino acid sequence [3-5]. According to their similarities, it has been suggested that helicase activation in mammals has diverged in complexity during evolution from that in yeasts and may involve additional partners that interact with TopBP1 [3-5].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	DNA replication regulator SLD3	chromatin binding binding	cellular response to stimulus regulation of cellular process regulation of cell cycle phase transition response to stimulus signaling G2/M transition of mitotic cell cycle negative regulation of biological process negative regulation of cell cycle cell cycle phase transition intracellular signal transduction mitotic cell cycle negative regulation of mitotic cell cycle cell communication mitotic G2/M transition checkpoint regulation of mitotic cell cycle cellular response to stimulus regulation of cellular process regulation of cell cycle phase transition response to stimulus signaling G2/M transition of mitotic cell cycle negative regulation of biological process negative regulation of cell cycle cell cycle phase transition intracellular signal transduction mitotic cell cycle negative regulation of mitotic cell cycle cell communication mitotic G2/M transition checkpoint regulation of mitotic cell cycle mitotic DNA integrity checkpoint signaling negative regulation of cellular process negative regulation of cell cycle phase transition signal transduction cell cycle DNA replication checkpoint signaling regulation of cell cycle cell cycle process cell cycle G2/M phase transition regulation of biological process mitotic DNA replication checkpoint signaling negative regulation of mitotic cell cycle phase transition regulation of G2/M transition of mitotic cell cycle regulation of cell cycle process biological regulation DNA integrity checkpoint signaling regulation of cell cycle G2/M phase transition negative regulation of cell cycle process cell cycle checkpoint signaling regulation of mitotic cell cycle phase transition mitotic cell cycle checkpoint signaling mitotic cell cycle process negative regulation of cell cycle G2/M phase transition cellular process negative regulation of G2/M transition of mitotic cell cycle mitotic cell cycle phase transition nucleobase-containing compound metabolic process DNA replication metabolic process primary metabolic process DNA metabolic process macromolecule metabolic process nucleic acid metabolic process DNA-templated DNA replication DNA replication initiation mitotic DNA replication regulation of DNA-templated DNA replication initiation cell cycle DNA replication initiation nuclear DNA replication cell cycle DNA replication regulation of mitotic DNA replication initiation mitotic DNA replication initiation regulation of primary metabolic process nuclear cell cycle DNA replication initiation regulation of nucleobase-containing compound metabolic process regulation of mitotic cell cycle DNA replication regulation of nuclear cell cycle DNA replication regulation of macromolecule metabolic process regulation of DNA-templated DNA replication regulation of metabolic process regulation of DNA replication regulation of DNA metabolic process double-strand break repair DNA recombination double-strand break repair via break-induced replication cellular response to stress DNA damage response response to stress recombinational repair double-strand break repair via homologous recombination DNA repair	membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen membrane-bounded organelle DNA replication preinitiation complex protein-containing complex intracellular anatomical structure protein-DNA complex nucleus membrane-enclosed lumen nuclear protein-containing complex intracellular membrane-bounded organelle intracellular organelle lumen intracellular organelle cellular anatomical structure nucleoplasm organelle lumen organelle nuclear lumen membraneless organelle chromosome, centromeric region intracellular membraneless organelle chromosome chromosomal region chromatin

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR041393	Sld3, N-terminal	Domain
A, B, C	IPR013948	DNA replication regulator Sld3, C-terminal	Domain
A, B, C	IPR042511	DNA replication regulator Sld3	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.