3WHL
Crystal structure of Nas2 N-terminal domain complexed with PAN-Rpt5C chimera
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
G | PF17862 | e3whlG2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17862 | ECOD (1.6) |
G | PF00004 | e3whlG1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
A | PF17862 | e3whlA2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17862 | ECOD (1.6) |
A | PF00004 | e3whlA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
C | PF17862 | e3whlC2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17862 | ECOD (1.6) |
C | PF00004 | e3whlC1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
E | PF17862 | e3whlE2 | A: alpha arrays | X: Histone-like | H: Histone-related | T: AAA+ ATPase lid domain | F: PF17862 | ECOD (1.6) |
E | PF00004 | e3whlE1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: PF00004 | ECOD (1.6) |
B | PF18265 | e3whlB1 | A: alpha bundles | X: YvfG-like | H: Probable 26S proteasome regulatory subunit p27 (From Topology) | T: Probable 26S proteasome regulatory subunit p27 | F: PF18265 | ECOD (1.6) |
D | PF18265 | e3whlD1 | A: alpha bundles | X: YvfG-like | H: Probable 26S proteasome regulatory subunit p27 (From Topology) | T: Probable 26S proteasome regulatory subunit p27 | F: PF18265 | ECOD (1.6) |
F | PF18265 | e3whlF1 | A: alpha bundles | X: YvfG-like | H: Probable 26S proteasome regulatory subunit p27 (From Topology) | T: Probable 26S proteasome regulatory subunit p27 | F: PF18265 | ECOD (1.6) |
H | PF18265 | e3whlH1 | A: alpha bundles | X: YvfG-like | H: Probable 26S proteasome regulatory subunit p27 (From Topology) | T: Probable 26S proteasome regulatory subunit p27 | F: PF18265 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF17862 | AAA+ lid domain (AAA_lid_3) | AAA+ lid domain | This entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. | Domain | |
PF00004 | ATPase family associated with various cellular activities (AAA) (AAA) | ATPase family associated with various cellular activities (AAA) | AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. | Domain | |
PF18265 | Nas2 N_terminal domain (Nas2_N) | Nas2 N_terminal domain | Nas2 is a proteosome assembly chaperone. Nas2 bivalently binds the proteasome Rpt5 subunit. The Nas2 N-terminal helical domain masks the Rpt1-interacting surface of Rpt5 [1]. | Domain | |
PF00595 | PDZ domain (PDZ) | PDZ domain | PDZ domains are found in diverse signaling proteins. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR041569 | AAA ATPase, AAA+ lid domain | Domain | |
IPR032501 | Proteasomal ATPase, second OB domain | Domain | |
IPR003960 | ATPase, AAA-type, conserved site | Conserved Site | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR023501 | Proteasome-activating nucleotidase PAN | Family | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR041569 | AAA ATPase, AAA+ lid domain | Domain | |
IPR032501 | Proteasomal ATPase, second OB domain | Domain | |
IPR003960 | ATPase, AAA-type, conserved site | Conserved Site | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR012340 | Nucleic acid-binding, OB-fold | Homologous Superfamily | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily | |
IPR040815 | Nas2, N-terminal | Domain | |
IPR001478 | PDZ domain | Domain | |
IPR035269 | 26S Proteasome non-ATPase regulatory subunit 9 | Family | |
IPR036034 | PDZ superfamily | Homologous Superfamily |