3WD8 | pdb_00003wd8

TypeIII polyketide synthases

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d3wd8d1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	calamondin (Citrus x microcarpa ) [TaxId: 164113 ],	SCOPe (2.08)
D	d3wd8d3	Artifacts	Tags	Tags	Tags	N-terminal Tags	calamondin (Citrus x microcarpa ) [TaxId: 164113 ],	SCOPe (2.08)
C	d3wd8c1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	calamondin (Citrus x microcarpa ) [TaxId: 164113 ],	SCOPe (2.08)
C	d3wd8c3	Artifacts	Tags	Tags	Tags	N-terminal Tags	calamondin (Citrus x microcarpa ) [TaxId: 164113 ],	SCOPe (2.08)
B	d3wd8b1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	calamondin (Citrus x microcarpa ) [TaxId: 164113 ],	SCOPe (2.08)
B	d3wd8b3	Artifacts	Tags	Tags	Tags	N-terminal Tags	calamondin (Citrus x microcarpa ) [TaxId: 164113 ],	SCOPe (2.08)
A	d3wd8a1	Alpha and beta proteins (a/b)	Thiolase-like	Thiolase-like	automated matches	automated matches	calamondin (Citrus x microcarpa ) [TaxId: 164113 ],	SCOPe (2.08)
A	d3wd8a3	Artifacts	Tags	Tags	Tags	N-terminal Tags	calamondin (Citrus x microcarpa ) [TaxId: 164113 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	ACP_syn_III_C	e3wd8D2	A: a/b three-layered sandwiches	X: Thiolase-like (From Topology)	H: Thiolase-like (From Topology)	T: Thiolase-like	F: ACP_syn_III_C	ECOD (1.6)
D	Chal_sti_synt_N	e3wd8D1	A: a/b three-layered sandwiches	X: Thiolase-like (From Topology)	H: Thiolase-like (From Topology)	T: Thiolase-like	F: Chal_sti_synt_N	ECOD (1.6)
C	ACP_syn_III_C	e3wd8C2	A: a/b three-layered sandwiches	X: Thiolase-like (From Topology)	H: Thiolase-like (From Topology)	T: Thiolase-like	F: ACP_syn_III_C	ECOD (1.6)
C	Chal_sti_synt_N	e3wd8C1	A: a/b three-layered sandwiches	X: Thiolase-like (From Topology)	H: Thiolase-like (From Topology)	T: Thiolase-like	F: Chal_sti_synt_N	ECOD (1.6)
B	ACP_syn_III_C	e3wd8B2	A: a/b three-layered sandwiches	X: Thiolase-like (From Topology)	H: Thiolase-like (From Topology)	T: Thiolase-like	F: ACP_syn_III_C	ECOD (1.6)
B	Chal_sti_synt_N	e3wd8B1	A: a/b three-layered sandwiches	X: Thiolase-like (From Topology)	H: Thiolase-like (From Topology)	T: Thiolase-like	F: Chal_sti_synt_N	ECOD (1.6)
A	ACP_syn_III_C	e3wd8A2	A: a/b three-layered sandwiches	X: Thiolase-like (From Topology)	H: Thiolase-like (From Topology)	T: Thiolase-like	F: ACP_syn_III_C	ECOD (1.6)
A	Chal_sti_synt_N	e3wd8A1	A: a/b three-layered sandwiches	X: Thiolase-like (From Topology)	H: Thiolase-like (From Topology)	T: Thiolase-like	F: Chal_sti_synt_N	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (4.3.0)
C	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (4.3.0)
B	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (4.3.0)
A	3.40.47.10	Alpha Beta	3-Layer(aba) Sandwich	Peroxisomal Thiolase	Chain A, domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Type III polyketide synthase quinolone synthase	acyltransferase activity acridone synthase activity acyltransferase activity, transferring groups other than amino-acyl groups transferase activity catalytic activity	polyketide biosynthetic process secondary metabolite biosynthetic process biosynthetic process polyketide metabolic process metabolic process cellular process secondary metabolic process	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure organelle endoplasmic reticulum cytoplasm intracellular membrane-bounded organelle endomembrane system

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001099	Chalcone/stilbene synthase, N-terminal	Domain
A, B, C, D	IPR016039	Thiolase-like	Homologous Superfamily
A, B, C, D	IPR012328	Chalcone/stilbene synthase, C-terminal	Domain
A, B, C, D	IPR011141	Polyketide synthase, type III	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.