3VTO | pdb_00003vto

The crystal structure of the C-terminal domain of Mu phage central spike

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F [auth R]	SCOP2B Superfamily	Phage fibre proteins	8095957	3000351	SCOP2B (2022-06-29)
E [auth Q]	SCOP2B Superfamily	Phage fibre proteins	8095957	3000351	SCOP2B (2022-06-29)
D [auth P]	SCOP2B Superfamily	Phage fibre proteins	8095957	3000351	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Phage fibre proteins	8095957	3000351	SCOP2B (2022-06-29)
B	SCOP2 Family	Membrane-piercing spike-like	8079914	4005039	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Phage fibre proteins	8095957	3000351	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	Phage fibre proteins	8095957	3000351	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F [auth R]	ABC_tran	e3vtoR1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
E [auth Q]	ABC_tran	e3vtoQ1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
D [auth P]	ABC_tran	e3vtoP1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
C	ABC_tran	e3vtoC1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)
B		e3vtoB1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: NagB/RpiA/CoA transferase-like	F:	ECOD (v294.1)
A	ABC_tran	e3vtoA1	A: a/b three-layered sandwiches	X: beta-Grasp	H: HTH	T: winged helix domain	F: ABC_tran	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
E [auth Q]	6.20.170.10	Special	Other non-globular	heat- and protease-stable fragment of the bacteriophage t4 short fibre, domain 2		CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D [auth P], E [auth Q], A, B, C, D [auth P], E [auth Q], F [auth R]	Protein gp45	cation binding ion binding binding metal ion binding small molecule binding	symbiont genome ejection through host cell envelope biological process involved in interspecies interaction between organisms symbiont entry into host cell viral process symbiont entry into host viral life cycle symbiont genome ejection through host cell envelope, contractile tail mechanism biological process involved in interaction with host biological process involved in symbiotic interaction virion assembly viral tail assembly	virus tail virion component virus tail, baseplate host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D [auth P], E [auth Q], A, B, C, D [auth P], E [auth Q], F [auth R]	IPR014462	Phage-associated protein Gp45	Family
A, B, C, D [auth P], E [auth Q], A, B, C, D [auth P], E [auth Q], F [auth R]	IPR013046	Phage baseplate assembly protein V/Gp45	Family
A, B, C, D [auth P], E [auth Q], A, B, C, D [auth P], E [auth Q], F [auth R]	IPR053861	Bacteriophage Mu Gp45, N-terminal	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.