3V4H | pdb_00003v4h

Crystal structure of a type VI secretion system effector from Yersinia pestis

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
B	d3v4hb_	All beta proteins	Hcp1-like	Hcp1-like	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)
A	d3v4ha_	All beta proteins	Hcp1-like	Hcp1-like	automated matches	automated matches	(Yersinia pestis ) [TaxId: 632 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	T6SS-like	8100108	3000580	SCOP2B (2022-06-29)
A	SCOP2 Family	Hcp1-like	8100107	4001941	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	T6SS-like	8100108	3000580	SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	T6SS_HCP	e3v4hB1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: T6SS_HCP	ECOD (1.6)
A	T6SS_HCP	e3v4hA1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: FMN-binding split barrel	F: T6SS_HCP	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	2.30.110.20	Mainly Beta	Roll	Pnp Oxidase	Chain A	CATH (4.2.0)
A	2.30.110.20	Mainly Beta	Roll	Pnp Oxidase	Chain A	CATH (4.2.0)

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR036624	Hcp1-like superfamily	Homologous Superfamily
A, B	IPR053165	HSI-I assembly protein Hcp1	Family
A, B	IPR008514	Type VI secretion system effector Hcp	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.